Daucus carota (carrot): 108227857
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Entry
108227857 CDS
T05350
Name
(RefSeq) alanine--tRNA ligase, chloroplastic/mitochondrial
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108227857
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108227857
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108227857
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
108227857
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108227857
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108227857
Prokaryotic type
108227857
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
CDH1_2_SANT_HL1
Motif
Other DBs
NCBI-GeneID:
108227857
NCBI-ProteinID:
XP_017258712
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All DBs
Position
6:7908395..7918122
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AA seq
989 aa
AA seq
DB search
MMNEGLRVLSHSLPPPPLHRSSRINGRHHLCLPFLNFHPTPFHLSHSSGSLLLGNSVTMG
THEKQSKPRTVSATIQPTTGEVVAESQDVSTSGDSIRRRFLEFYASRGHRVLPSSSLVPD
DPTVLLTIAGMLQFKPIFLGQVPREVPRAATSQKCIRTNDIENVGRTSRHQTFFEMLGNF
SFGDYFKKEAIRWAWELSTLEFGLPSERLWISVFEEDDEAFTIWHDEIGVPVHRIKRMGE
EDNFWSSGITGPCGPCSEIYYDFHPEKGYTDTDLNDDTRFIEFYNLVFMQYNKKEDGSLE
PLKQRNIDTGLGLERMARILQKVPNNYETDLIFPIIEKASEMANVRYALADDPTKTKLKI
IGDHLRAIVYLISDGVIPSNIGRGYIVRRLIRRVVRTGRLLGIKGDGAGNLDGAMLPVLA
EIVIDLSPQIDIDVKSRSPRILEELKREELRFILTLERGEKLLEQMLANASASAQETSTV
PYLSGKDAFILYDTYGFPVEITMEVAAERGVSIDMEAFDSEMENQRRQSQAAHSTVKLTV
ENGADQTKNIPDTEFLGYEYLSAKAVVEGLLINGSSVLQVSEGNEVDILLNRTPFYAESG
GQIGDQGFLYVTDAENHQKAVVEIKDVQRSLGNIFVHKGSIREGIIEVGKEVEAAVDKNM
RQRSKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFNRPLLENEVMEIENLI
NGWIGDASLLQTKVMPIVDAKRAGAIAMFGEKYGDQVRVVEVPGVSMELCGGTHVSNTAE
IRGFKIISEQGIASGIRRIEAVAGEAFIEYVSARDNYMKQLCSTLKVKAEEVTTRVDALL
EELRNTKNEVSEVRSKAAVDKASVIASKAFTVGNSKIRVLVECMDDVDADSLKSAAEYIV
DTLQDPAAVILGSCPGEGKVSLVAAFTPGVVNLGLQAGKFIGPIAKICGGGGGGRPNFAQ
AGGRKPENLSSALEKARSDLLSVLSEKTG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgaaggcttaagggtattatcacactctcttcctcctcctcctctgcataga
agctcaagaattaatggcagacaccacctttgccttccttttctcaatttccatcccacg
cctttccatctttcacattctagtggtagcttgctcctcggaaattctgttacaatgggg
acacatgagaaacagtccaaaccaagaactgtatcagcaactatacaacctacgactgga
gaagtagtggctgagtctcaggatgtctccacaagtggggattccattcgacgacgattc
cttgaattttatgcttcacgtggccatcgggtgcttccaagctcttctcttgtaccagat
gatcctacagttctcctgaccattgctgggatgcttcaatttaaacctatattccttgga
caggtgcctagagaagtaccccgtgctgctacatctcagaagtgtattcgcacaaatgac
attgagaatgttggtcgaacatctcgacatcagactttttttgagatgcttggaaatttc
agttttggagactacttcaagaaagaagcaatcagatgggcatgggaactatcaacctta
gaatttggattgccatccgagcgattgtggattagtgtttttgaagaagatgatgaagct
tttacaatatggcatgatgagataggtgttcctgtgcatcgtataaagagaatgggtgaa
gaggacaacttttggtcaagtggaataactggtccttgtggtccatgctctgagatttat
tatgatttccatcctgagaaaggatatacagataccgaccttaatgatgataccagattt
atagagttctacaatcttgttttcatgcaatacaataaaaaagaggatggttcacttgaa
cccttgaagcagaggaatatagatactggtttgggtttggagcgcatggcccgtatcctg
caaaaggttccaaacaattatgaaactgacttgatttttccaattatagagaaggcctca
gaaatggcaaatgtccgttatgcacttgcagatgaccctacaaaaacaaagttgaaaata
attggtgatcacctgcgagcaattgtttatcttatatcagacggagtaatcccgtctaac
attggtagaggttatatagttagacggttgatcagaagagttgttcgtacaggtaggttg
cttggcataaagggtgatggagcaggaaacctagatggagcgatgttgccagtacttgct
gaaatagttatcgatttgagccctcaaatagatatagatgtaaaatcaagatcaccccgc
atccttgaggaattaaaaagggaagaattacgatttatactgacattggagagaggtgaa
aaacttcttgagcaaatgctagcaaatgcatcagcaagtgctcaggaaactagcaccgtt
ccttatttgtcaggaaaggatgcctttattttgtatgacacctatggatttcctgtggag
ataactatggaagttgctgctgaacgtggagtgagtatagacatggaagcttttgattct
gaaatggagaaccaaagacgccaatctcaggctgcacatagtactgtcaaacttactgtt
gaaaatggagcagatcaaacaaaaaatatccctgacactgagtttctaggttatgagtat
ctttctgctaaagctgtggttgaaggtcttctgataaatgggagctcagttttacaggtt
tctgaaggaaatgaagttgacatcttactgaacaggacaccattctatgccgaatcaggt
ggtcaaattggagatcaagggtttttgtatgttactgatgctgaaaatcatcagaaagct
gtcgtagagataaaggacgtgcaaagatcccttggtaatatatttgttcataaaggcagt
attagggaaggaattatagaggttggcaaagaggttgaagctgccgtagataaaaacatg
aggcagcgatctaaggttcatcatactgccactcatttgttgcaagcagcacttaaaaaa
gtaattggccaggaaacatcacaagctggttctttagtagcttttgatcgtcttagattt
gatttcaactttaacagacctctactggagaatgaggttatggagattgaaaacctaatt
aatggatggattggtgatgcatcacttcttcaaactaaagtaatgcctatagtagatgcc
aaaagagctggagctattgcaatgtttggagaaaaatatggagatcaggtacgggttgta
gaggttccaggtgtatctatggaactctgtggtggtacccatgtcagcaatacagctgaa
atacgtggcttcaagataatctcagaacagggaattgcttctggtatcaggcggattgaa
gctgttgctggtgaagcttttatcgagtatgtcagtgccagagataactacatgaagcag
ctttgctccactctcaaagtaaaagctgaagaggtaactactagggttgatgcacttctt
gaagaattaagaaatacaaagaatgaagtttcagaagtacgtagcaaagcagcagttgac
aaagcatcagtgattgcaagcaaggcatttactgtaggaaattcgaagatcagggtacta
gttgagtgcatggatgatgttgatgcggattcactgaagagtgctgcagaatatattgtg
gatacattacaagatccagcagctgtgattttgggttcatgtccaggtgaagggaaggtg
agtttagtcgctgcattcactccaggggttgttaatttgggactacaagcagggaagttt
ataggaccaatagctaaaatatgtggtggaggtggaggtggcaggcctaattttgcgcaa
gcaggtggaagaaagcctgagaatttgtcaagtgcacttgagaaagcccgttctgacctt
ctctcagttttgtctgagaaaacaggctga
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