Daucus carota (carrot): 108227950
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Entry
108227950 CDS
T05350
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108227950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108227950
Enzymes [BR:
dcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108227950
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
108227950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
DZR_2
DZR
Motif
Other DBs
NCBI-GeneID:
108227950
NCBI-ProteinID:
XP_017258851
LinkDB
All DBs
Position
1:complement(27105885..27127867)
Genome browser
AA seq
1915 aa
AA seq
DB search
MEESDKKKIFSVRIVSIDYYMSPPITDMDISYSSFQGGRVKEVPVIRIYGSTPAAQKTCL
HIHQALPYLYVPCSELSLRPELEGEACMHSLCLAIEKALKLKGNAGSKRQHVHGCSVVQA
RRLYGYKSSEEFFVKIFLYYPQDVSRAANLLVGGAILDKVLQPHESHIPFLLQFLIDHNL
YGMGHLHVSKMKFRTPVPDGSQSEAKGNRHHRQKTDSSDCFPVDSLVESSGNACFGLPLW
TSLTIPDGWLWQQSSQLDPSIGPNPYIISRQSTCQLEGDASVHEILNQQNLSYSSLSQTG
SDVKFVQSLIPIWEEFEKAGMHGVASLSIPGKPLPEDTLRILSDGGEFVDKYMELFSNTS
TQIKDHITIFSDDANVDESNRVICESSPYSKAKNSAGLDLCAEKLLADKVLSTVGPSNVK
SADYEAEALLKWLASSQAAEDINSDDELARETILSPLLPASTMVKMLERANIDYESQSQQ
ECQDILDCVEDSIDIVASKRKESRPIDDCQLPLKENITRAEGSNEERILISCSAKSSEIE
TNSEFEKSLQSYTPVDFGSGFTTIQKRKRPLQRSGSFSMDQKLEGDIHPEISNENCFGVN
NEIKRRNVATGCEENDLECSEETSVNIKSSMRDLMRRKRCYQVGLPECDTSHERVSIQEE
LKKDASLCIEDNSEDLKHRERNFSQQTAIVVRRTCEAQPKSGAAPVEPDNFRYGILPLLS
HSDHSGPLTITADGSCFGDINDPKVTAPTARSGNRYLGSMAIHEHTKIASQLVDSENQNS
AAELGSFENKTGEDLKDVSKIVTPLSFSRSDPCCRKLNFDDDILLETEKVLPTAAVCSSQ
PCTLQPQNIVFDNHGHFSGSHSTNPLQREMEVSAENPSGLDLRITHINTRCSSSGQHERN
EDQNTRRIAEDFNYHQKGVMGIPAHFYNDNSSIYILTPAISPPSADSVDRWLSQDDTDSH
SSLADARRDLGPHEDAIIAHVKQPIEESHTAGLRPLHSDSTKMPNNDVTTLIIEQNTCYA
EDTSQISAPDGKSKLTPTSQIGFQDPASAGGSQQLTIFSIEVQAQSKGDSRPDPRLDAIN
FIVLVIFEDDGSLTETHVLLHSDTAPAPRNLDGISGCKMLVFSEEKELFNHFIKFICSYD
PDILMGWDIQGGSLGFLAERAAQIGIGLLNKISRTVSQTKELGQDSDVRVKSVITDALLE
STVADSAVLDDAIIEDEWGRTHASGIHVSGRIILNCWRLVRSEVKLNMYTAEAVAEEVLR
QKLPFIPCKELTKWFSSGPGRARYRCIEYIINKAKLNIEIMTRLDMINRTSELARVFGID
FFSVLSRGSQYRVESMLLRLAHTQNYLAIAPGSQQVASQPAMECLPLVMEPESGFYADPV
VVLDFQSLYPSMIIAYNLCFCTCLGKVTPAKSNTLGVSSYSPDPNVLMDLKDEILLTPNG
VMYVPSKVRKGVLPRLLEEILSTRIMVKQAMKKLAPSERVRERIFNARQLALKLIANVTY
GYTAAGFSGRMPCAELADSIVQCGRRTLETAISFVNAHEKWKAKVLYGDTDSMFVLLRGR
SVKEALEIGQDIASTVTAMNPNPVTLKLEKVYHPCFLLTKKRYVGYSYESPYQVKPIFDA
KGIETVRRDTCGAVSKTMEQSLRLFFEHQNLFKVKHYLLRQWKRILSGRVSLQDFVFAKE
VRLGTYSSRASSLPPAAIVATKAMKNDPRAEPRYAERIPYVVVHGEPGARLVDMVIDPLE
LLAINSPFKLNGLYYIKKQMIPALQRVFTLVGADLNLWFQEMPRPEQKAFGKHQLNALNP
NRTRIDSYYLSKHCILCGELVQASTYICGKCSKNEAAVATAMVGRTSKLEREIQHLADIC
RHCGGGDWIIESGVKCTSLACSVFFERRKVQKELQSLSVIAADADFYPRCIVEWF
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatcggacaagaagaaaatattcagcgtgcgcatcgtctcaatcgactactac
atgtctcctcccatcaccgatatggatatctcttacagctctttccaaggtgggagagta
aaggaagtgcctgttataagaatatatggctccactcctgctgctcagaaaacatgtctg
catattcaccaggctttaccttatttatatgttccatgttctgaattgtcccttcgacca
gagcttgaaggtgaagcttgcatgcactctctctgccttgctattgagaaggcattaaag
ctaaaagggaacgctggttcgaaacgtcagcatgtgcatggttgcagtgttgtccaagca
aggagattatatggatataaatcatcggaggaattttttgtcaagattttcctctattat
ccacaggatgtttctcgtgctgctaatctgcttgtgggaggtgcaatcctcgataaagtt
ttacagcctcacgagtcacacataccattccttctccagtttctgattgatcataacctg
tatgggatgggtcatttacatgtatcaaagatgaagttccgcacccctgtgccagatggt
tctcagagtgaagctaaggggaaccgacaccacagacagaagacggacagcagtgactgt
tttcctgttgattctctggttgagtcgagtggaaatgcatgtttcggtttacccctatgg
acttcccttacaattccagatggctggctttggcaacaatctagtcagttagatccttca
ataggtccaaatccctatattatctcacgtcaaagtacatgccaactagaaggagatgct
tcagttcatgagatactcaatcaacaaaatttatcatattcttcactctcacaaaccggg
tcagatgttaaatttgttcagtctctaataccaatatgggaggaattcgaaaaagctgga
atgcatggtgtagcctcactgtctattccaggaaaaccactcccagaagatactttgagg
attctgtcagatgggggtgaatttgtggacaaatatatggagttgttcagcaacacaagt
actcaaataaaggatcatattacaattttttctgatgatgccaatgtggatgagtctaat
cgtgttatatgtgagagtagcccatactctaaggctaaaaacagtgcggggcttgattta
tgtgctgagaaattattagctgacaaagttttgtccactgtcggaccatcaaatgtgaag
agtgcagattatgaagctgaagctctgcttaagtggcttgcatcttctcaagctgcagaa
gatataaactccgatgatgaacttgctcgtgagaccattttgagtcccttattacccgca
tcaaccatggtcaaaatgttagaaagagccaacatagattatgaaagtcaatcccagcaa
gagtgtcaggatattcttgactgtgttgaggactcgatagacattgttgcttcaaaaaga
aaggagtctcgtcccattgatgattgccaactaccattgaaggaaaatattacgcgggct
gaaggctctaatgaggaacgaatattaatttcatgttctgctaagtcatctgaaatagag
acgaacagtgaatttgagaagtccttgcaatcctacacacccgttgattttggttcagga
tttaccactattcagaaaagaaaaagacctctgcagaggtctggatctttttccatggat
cagaagttggaaggtgatatacatcctgaaatttccaatgagaattgttttggtgtgaac
aatgagattaaaagacgtaacgtagcaacagggtgtgaggagaatgatcttgaatgttca
gaggaaactagtgtgaatattaaatcttcgatgcgtgatttgatgaggagaaagcgatgc
taccaggttggactacctgaatgcgatacctctcatgaaagggtttccattcaagaggaa
ttgaaaaaagatgcatctctttgcatagaggacaatagtgaagacctaaagcatcgtgag
aggaacttttctcagcaaacagcaatagttgtgaggaggacttgtgaagcacaacctaaa
tcaggagcagcacctgttgaacctgacaacttcaggtatggaatattgcctttactttct
cacagtgatcactcaggtccattgacgatcactgctgatggaagttgttttggagatatt
aatgatccgaaagtcactgcacccactgccagatcaggaaacagatatctcggttccatg
gcaatacatgaacacaccaaaattgcatcacagttggttgactctgaaaatcaaaattct
gcagccgaactggggtcgtttgagaacaaaacaggcgaagatttaaaagacgtttctaaa
attgttacaccattgagttttagtcgctcagatccctgttgtagaaagttgaattttgat
gatgatatacttttggaaactgagaaagtgctgccaactgctgctgtgtgttcaagtcaa
ccatgtacccttcagccacaaaatattgtctttgacaatcacggtcatttttctggtagc
catagcaccaaccctttgcagagagaaatggaagtgtcggctgaaaatcccagtggactt
gacttaagaataactcatataaatacgcgatgttccagcagtgggcaacacgaaagaaac
gaagatcaaaacactagacgtatagcagaagattttaattatcaccaaaaaggagtcatg
ggcattcctgctcacttttacaatgataattcttctatatacattttgacccctgcaatt
tctcctccatctgcagatagtgttgacagatggctgtcacaagatgacacagattcacac
agttctctagctgatgctcgtagagacttgggtcctcatgaagatgccatcatagctcat
gtgaaacagccaattgaagaaagccataccgctggactgcggcctttgcattcagactct
acaaagatgccaaacaatgatgttactacattaattattgaacaaaacacctgttacgca
gaagatacttctcagatatctgcacctgatggcaaatcaaagttaactcctacaagtcaa
attggatttcaggatcctgcaagtgctggtggatcgcagcaattaacaatttttagtata
gaggttcaagcacaatccaagggggattcccgacccgatcctcgactagatgccatcaat
tttatagttcttgttatttttgaagatgatggttcgttaaccgagactcatgttctttta
cacagtgatactgcacctgctccaaggaatcttgatgggatatctggttgcaagatgttg
gttttctccgaagaaaaggaattgtttaatcattttataaagttcatatgttcttatgat
ccagatatattaatgggatgggatattcagggtggttctcttggatttctcgccgaaagg
gctgctcagattggtattggtttacttaataaaatatctcgcacagtttcccaaaccaag
gaacttggtcaagattcagatgttcgtgtgaaaagtgtaataactgacgcacttctagag
tcgactgttgctgattctgcagtacttgatgatgccataattgaggatgagtggggtcga
acgcatgcaagcggtatccatgttagtggtagaattatcctcaattgttggcggttggtc
cgcagtgaagttaaacttaatatgtacacggctgaagctgtagctgaagaagttttgagg
caaaagctcccatttatcccttgcaaagaacttacaaaatggttttcaagtggtcctgga
cgagcaagataccgatgtatagaatatatcataaataaagcaaaactaaatattgagata
atgactcgacttgatatgattaatcgcacatcagaacttgctcgtgtgtttggcattgac
ttcttttcagttctctctcgagggtcacaatatcgtgttgaatctatgcttttgagattg
gcacatacacagaattatcttgcaattgcgcctgggagtcaacaggtagcttctcaacct
gcaatggaatgccttcctcttgtgatggaaccagaatcaggattttatgcagacccagtt
gtcgtgctagattttcagtcactctatccatcaatgataatcgcatacaacctctgcttc
tgcacatgcctcggaaaagttacacctgcaaagtcaaacaccttaggcgtgagttcatat
tcaccagatccaaatgttttgatggatttgaaagatgaaatattacttaccccaaatggt
gttatgtacgttccttcaaaggtccgtaaaggtgtactacctcgtttattagaagaaata
ttatctactagaatcatggtaaaacaggcaatgaaaaagctggcaccttcagagagggtc
cgtgaaaggatttttaatgccagacagctcgccctgaagctaatagcaaatgtaacatat
ggctatacagctgctgggtttagtggtcgcatgccatgtgcagagcttgctgatagtatt
gttcaatgtggccgtagaactttggaaactgctatttcatttgttaatgctcatgagaaa
tggaaagctaaggttctatatggtgatacagatagcatgtttgtactccttagaggacgt
tctgtgaaagaagcccttgaaattgggcaagatattgcatcaacagttactgcaatgaat
ccaaatccagttacattgaaattggagaaggtttaccatccttgttttcttcttacaaag
aagcgttatgtgggatacagttatgagagcccttaccaagtcaagccaatatttgatgcc
aaaggtattgagaccgtgcgcagagatacatgtggcgctgtttccaagacaatggagcag
tcattgagactttttttcgaacatcagaatctttttaaggttaagcactacttgcttcgt
cagtggaaacggattctatctggaagggtctctcttcaggattttgtttttgcgaaggag
gtacggttaggcacatatagttctcgtgcttcctcgcttcctccggctgcaattgtggcc
actaaagctatgaaaaatgatccaagggcagaaccccgttatgcagagagaataccttat
gttgtagtgcatggtgaacccggagctcgtttagttgatatggtaatagacccattggaa
ctcctggcaattaattctcctttcaaattgaatggtttgtattacatcaaaaagcaaatg
ataccagctttacaacgagtatttacactagttggagctgatttgaatctgtggtttcaa
gaaatgcctcgcccagagcaaaaggcttttggtaaacaccaactgaatgcattgaatcct
aaccgaactagaatagactcttactatctctcaaagcattgtatcctttgtggtgagttg
gtccaggcatcaacttatatatgtggtaaatgttctaaaaatgaggctgctgttgcaaca
gccatggttggaagaacctcaaaactcgaaagagagattcaacacctagctgacatttgc
cgacattgtggaggtggagattggatcatagaaagtggtgtgaaatgtacatcgcttgca
tgctccgtcttctttgagaggaggaaagtccagaaagagttgcaatctctgtctgttatt
gccgcagacgcagacttctatcccaggtgcattgtggagtggttctaa
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integrated database retrieval system
