Daucus carota (carrot): 108227972
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Entry
108227972 CDS
T05350
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108227972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108227972
Ubiquitin system [BR:
dcr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
108227972
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Ortholog
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GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Dsc3_N
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
108227972
NCBI-ProteinID:
XP_017258885
UniProt:
A0AAF0XER7
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Position
6:38717674..38720203
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AA seq
381 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaactcttactgggaagaccatcactcttgaggtagaaagctcg
gacaccattgacaatgtcaaggctaagattcaagacaaagaaggtatccctccagatcag
cagaggctcatctttgctggtaaacagcttgaggatggtcgtaccttagctgattacaat
attcagaaggaatcgacccttcatttggttcttcgtctacgtggtggcatgcagatcttt
gttaagacacttactggaaagaccatcaccctagaagttgaaagctctgacactattgat
aatgttaaagctaagatccaggacaaggagggcatccccccagaccagcagagactcatt
tttgctggcaagcagctggaagacggtcgcacccttgctgactacaacatccagaaggaa
tcgacccttcatttggtgctccgtctacgtggtggcatgcaaatctttgtcaagacgctt
actggaaagacaattaccttggaggtagagagctctgatacaattgacaatgttaaggca
aagatccaagacaaagagggaattcctccagatcagcagaggttgatatttgctgggaag
cagttggaggacggaaggacattggcagattacaacattcaaaaggaatccacacttcat
ttggtattgaggctgaggggtggaatgcagatctttgtgaagactttgacaggaaagacc
atcacgctagaggtggagagctctgacactattgataatgtcaaagcaaagattcaagac
aaggagggcatcccaccagaccagcagaggcttatatttgctggaaaacaacttgaagat
ggccgcacacttgcagactacaatattcaaaaagagtctacccttcatcttgtgctccgt
ctccgtggtggaatgcaaatctttgtgaagacattgactggcaagaccatcaccttggag
gttgagagctcagatacaattgataatgtgaaggcgaaaatccaggacaaagagggaatc
ccaccagatcaacagcgtttgatttttgctggaaagcagttggaggatggaagaaccctg
gctgactacaacatccagaaagagtccacccttcaccttgttcttcgtctacgtggtggt
ttttga
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