KEGG   Daucus carota (carrot): 108227972
Entry
108227972         CDS       T05350                                 
Name
(RefSeq) polyubiquitin
  KO
K08770  ubiquitin B/C
Organism
dcr  Daucus carota (carrot)
Pathway
dcr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108227972
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcr04121]
    108227972
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dcr04147]
    108227972
Ubiquitin system [BR:dcr04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108227972
Exosome [BR:dcr04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   108227972
  Exosomal proteins of other body fluids (saliva and urine)
   108227972
  Exosomal proteins of colorectal cancer cells
   108227972
  Exosomal proteins of bladder cancer cells
   108227972
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 TBK1_ULD Dsc3_N DUF2604 Ubiquitin_5 UBL_UBAC1
Other DBs
NCBI-GeneID: 108227972
NCBI-ProteinID: XP_017258885
UniProt: A0AAF0XER7
LinkDB
Position
6:38717674..38720203
AA seq 381 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGF
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaactcttactgggaagaccatcactcttgaggtagaaagctcg
gacaccattgacaatgtcaaggctaagattcaagacaaagaaggtatccctccagatcag
cagaggctcatctttgctggtaaacagcttgaggatggtcgtaccttagctgattacaat
attcagaaggaatcgacccttcatttggttcttcgtctacgtggtggcatgcagatcttt
gttaagacacttactggaaagaccatcaccctagaagttgaaagctctgacactattgat
aatgttaaagctaagatccaggacaaggagggcatccccccagaccagcagagactcatt
tttgctggcaagcagctggaagacggtcgcacccttgctgactacaacatccagaaggaa
tcgacccttcatttggtgctccgtctacgtggtggcatgcaaatctttgtcaagacgctt
actggaaagacaattaccttggaggtagagagctctgatacaattgacaatgttaaggca
aagatccaagacaaagagggaattcctccagatcagcagaggttgatatttgctgggaag
cagttggaggacggaaggacattggcagattacaacattcaaaaggaatccacacttcat
ttggtattgaggctgaggggtggaatgcagatctttgtgaagactttgacaggaaagacc
atcacgctagaggtggagagctctgacactattgataatgtcaaagcaaagattcaagac
aaggagggcatcccaccagaccagcagaggcttatatttgctggaaaacaacttgaagat
ggccgcacacttgcagactacaatattcaaaaagagtctacccttcatcttgtgctccgt
ctccgtggtggaatgcaaatctttgtgaagacattgactggcaagaccatcaccttggag
gttgagagctcagatacaattgataatgtgaaggcgaaaatccaggacaaagagggaatc
ccaccagatcaacagcgtttgatttttgctggaaagcagttggaggatggaagaaccctg
gctgactacaacatccagaaagagtccacccttcaccttgttcttcgtctacgtggtggt
ttttga

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