Daucus carota (carrot): 108228040
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Entry
108228040 CDS
T05350
Name
(RefSeq) bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00740
Riboflavin metabolism
dcr00790
Folate biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
dcr01240
Biosynthesis of cofactors
Module
dcr_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
108228040
00790 Folate biosynthesis
108228040
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
108228040
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
108228040
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
108228040
NCBI-ProteinID:
XP_017258997
UniProt:
A0A164VRS3
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Position
6:complement(23027692..23032238)
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AA seq
548 aa
AA seq
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MASITMSSTILSKSQTLDRSTILNGLHRVKVFPKNGRVSEASIGMVMVDGKVKSTLLPGE
GGFLSHQNGRKGFLLNALPAGIEMQPDSIALGTLAAETIPIPSDFSVDGDEFDLDQPTAG
FSSIQEAIEDIRQGKMVVVVDDEDRENEGDLIMAASKATPESMAFIVKHGTGIICVSMKE
EDLERLQIPLMVSHKDNEEILSTAFTVTVDAKHGTTTGVSARDRATTILALANKDSTPQD
FNRPGHIFPLKYRVGGVLKRAGHTEASVDLTVLAGFEPVSVLCEIVDDDGSMARLPKLRE
FAKRENLKIVSIADLIRYRRKRDQLVERSSAARIPTTWGPFTSYCYRSIIDGIEHIAMVK
GEIGDGEDVLVRVHSECLTGDIFGSARCDCGTQLGMAMQQIEAAGRGVLVYLRGHEGRGI
GLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPAKYV
GLKGYGLAVAGRVPLVTLITKENKRYLETKRAKMGHVYYDLGLNGNSSAASENGHVSTEE
PSTVTSVP
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcttctatcaccatgtcttcaactattctgtccaaatcacagacattggacaggtcc
actatattgaatggactgcatcgtgtaaaagtatttcccaaaaatggacgagtatcagag
gcgtctatcgggatggtcatggttgatggaaaagtgaaatctactttattacctggagaa
ggtggtttcttgtcccatcaaaatggcaggaaaggtttcctcctcaatgctcttcctgct
gggattgagatgcagcccgattcaatagctctggggacacttgcagctgaaaccattccc
atacctagtgacttttctgttgatggagatgaatttgatctggaccagcccacggctggt
ttctcctccatccaggaagccatcgaagatattcgtcaaggaaagatggtagtggttgtc
gatgatgaagaccgagaaaatgaaggagatttaataatggcagcatcaaaggctactcca
gaatctatggctttcattgtgaagcatggcactggaattatttgtgtgagtatgaaggag
gaagacttggagagattgcagattcctctcatggtatctcacaaagacaatgaggagata
ttgtctactgcattcacagtgactgtggatgcgaaacatggtacaactacaggggtgtcc
gctcgtgatagggcgacaacaatactagctcttgcaaataaggattcaacacctcaagat
ttcaatcgtccgggccatatatttcctttgaaatatagggttggtggtgttctaaaaaga
gcaggtcatacagaagcttctgtagatcttaccgtgctagctgggttcgaacctgtttct
gttctatgtgagattgtggatgatgatggttccatggctagactgccaaaacttcgggaa
tttgcaaaaagggagaacttgaagattgtgtccattgctgatttgatcagatataggaga
aagagggatcaattagtagagcgttcttctgctgcaagaatacctacaacttggggacca
tttacttcttactgttacagatcaatcatagatggcattgagcatattgctatggtcaag
ggtgaaataggggatggagaagatgttcttgtcagggtacactcggaatgccttacagga
gatatatttgggtcagcaagatgtgattgtggtacccagcttggaatggcaatgcaacaa
attgaagctgcgggaagaggtgtattggtataccttcgtggtcatgaaggacggggcatt
gggttgggccacaaacttcgtgcgtataatctgcaagatgatgggcgtgacactgttgaa
gccaacgaggagctaggactgcctgttgattcaagagagtatggtattggtgcacagatt
ttaagagatcttggggttcgaactatgaagctgatgacaaataatcctgcaaaatatgtc
ggtctcaagggatacggtttggcagttgcaggaagagttccccttgtgaccctaattaca
aaggagaataagagatatcttgaaacaaagcgtgcgaaaatgggtcatgtttactatgat
ctaggactcaatggaaacagcagtgctgctagtgagaatggtcatgtaagcactgaagag
ccatccacagtgacatctgtgccatga
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