Daucus carota (carrot): 108228074
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Entry
108228074 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108228074
KO
K14574
ribosome maturation protein SDO1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108228074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108228074
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108228074
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_domain_II
SBDS_N
SBDS_C
zf-C2H2_jaz
Rab3-GAP_cat_C
zf-met
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
108228074
NCBI-ProteinID:
XP_017259038
UniProt:
A0A161ZZN2
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Position
6:complement(40649108..40656617)
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AA seq
366 aa
AA seq
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MSKTIVQPVGQKRLTNVAVVRLKKHGCRFEIACYKNKVLSWRSGIEKDLDEVLQSHTVYS
NVSKGVLAKSRDLKIAFGQDEYDDDEKIDHEKICLEILEKGELQVAGKERESQLSSQFRD
IATIVMQKTINPETHRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKHFPIKRS
PMRLRLTVPGQAFSSVSEKLNEWKSSVVSKEESGNKLSVICEMEPGFFRDCDAMVRNFQG
RLEILAISVHAEGDTNVDHYDDQEEPSSNLPKASTGYDVQLSEKLNKQTISEKKADAIGD
VKQQSKCSTCNAYVGDSKQYREHFKSEWHKHNLKRKTKQLPPVSAEECVGDMEISDSRAD
LKDYSF
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagacgattgtacaacctgtagggcagaaaaggctgaccaacgtagctgtggtg
cgtctcaagaaacacggttgtcgctttgaaattgcttgttacaagaacaaagtcctctcc
tggcgctccggcatagagaaagatttggatgaagtcttgcaatcacataccgtgtattct
aatgtatcaaaaggagttcttgccaaatccagggatttaaaaatagctttcgggcaggac
gaatatgatgatgatgaaaagattgatcatgaaaaaatttgtctagagattttggaaaag
ggagagctacaagttgctggaaaggaacgggaatcgcagttatcaagtcagtttagggat
attgcaactattgtcatgcagaagaccataaaccctgaaactcatcgcccgtatacgatt
agcatgattgaacgtttaatgcatgaaatacattttgcagttgatccgcacaacagctcg
aagaaacaggcccttgaagtcattcgcgagcttcagaaacacttccccataaaacgatct
cctatgagattacgactgactgtgcctggacaggccttttcttctgtttccgagaaatta
aatgaatggaaatccagcgttgtttcgaaagaagaatctggaaataagctatctgttatc
tgtgagatggagccaggctttttccgagattgtgatgccatggtaaggaattttcagggt
aggttggaaatactcgctatctctgtgcatgcagaaggagacacaaatgttgatcactat
gatgatcaggaggaaccttcatcaaacttacccaaggcatcaactggttatgacgtccag
ctgagtgaaaagttgaacaaacaaacaatctctgagaaaaaagcagatgctattggagat
gtaaagcagcagagcaaatgcagtacatgcaatgcatatgtaggtgattcaaagcaatac
agggagcactttaagagtgaatggcacaaacacaacttgaagcgaaagactaagcaacta
cctccagtcagtgctgaagaatgcgtaggcgacatggagattagcgactcaagggcagat
ttaaaggattattctttttga
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