Daucus carota (carrot): 108228105
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Entry
108228105 CDS
T05350
Name
(RefSeq) peroxisome biogenesis protein 12 isoform X1
KO
K13345
peroxin-12
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108228105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108228105
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
108228105
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
PRIMA1
zf-RING_2
zf-rbx1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
108228105
NCBI-ProteinID:
XP_017259081
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Position
6:4750717..4763895
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AA seq
392 aa
AA seq
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MLFQVGGQGSRPTFFEMAAAQQLPSSLRAALTYSLGVLALRRPLLHKVLDYEDEFFALLT
LVLETHSLRNTDACFSESLYGLRRRAVNMKLKNKVNSEAGERIHQSSLEKHQKVLSVAFL
VVLPYFKSKLYTIYNKEREAALQATLWGHVGDRLNENDYTGGDDHSSASSNASDVEGSAR
ATMAKRIKKIIGVCYPWIHAGNEGLAFAYQLLYLLDATGFYSPGLHALGVHVCRATGQEL
MDTSSRISRIRSRERERLRGPPWLKTLQGTLLSCSYAVLDYAQTGLIAAVFFFKMMEWWY
QSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPAEKTICPLCSQKRANPSVISVSGFVFCY
TCVFKYVSQYKRCPITLMPATVDHIRRLFQDV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaggtaggagggcaagggagtcgccccaccttctttgaaatggcagctgct
caacagcttccttctagtctccgtgctgctctcacctactcccttggtgtgctggctttg
agaagacccttacttcataaggttttagactacgaagatgagttctttgcacttctcact
cttgttcttgaaacccatagtcttcgaaatacagatgcttgtttttcagagtctttatat
ggcttgcgaaggagagcagttaatatgaaattgaagaataaagttaactcagaagcaggc
gagaggatccatcagtcaagtttggaaaagcatcaaaaagttctttcagttgcatttctg
gttgtgctaccatacttcaagtcaaagttgtacacaatctataacaaagaaagggaagct
gcactacaagcaactttatggggtcatgttggtgacagattgaatgaaaatgactatacc
ggtggagatgatcattcgtctgcttcaagcaatgcttcagatgtggaaggatcagctaga
gcaactatggcaaagagaattaagaagattatcggtgtctgttatccatggatacatgct
ggaaacgaaggactagcttttgcgtatcagctattatatcttttggatgcaactgggttt
tattctccaggattacatgcacttggggttcatgtttgtcgagctacaggacaggagctg
atggacacttcttcacgaatttctaggataagaagccgtgagcgagaaagacttcgtggt
cctccgtggttgaagactttacaaggaacattactcagttgctcatatgcagtcctagat
tatgcccaaactggtttaattgctgctgtattcttctttaaaatgatggagtggtggtat
caatctgctgaggagagaatgtcagctcccacagtgtatcctcctccaccaccaccacct
cccccaaaggttgccaaagagggtattccactgccagctgagaaaactatatgccctttg
tgttcacagaagcgtgcaaatccctcagttatttcggtatcggggttcgtcttttgctat
acttgcgtatttaagtatgtctcacagtacaaacggtgtcctatcacgttaatgcctgca
accgtggatcacataaggaggctctttcaggatgtttaa
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