Daucus carota (carrot): 108228132
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Entry
108228132 CDS
T05350
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108228132
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
108228132
NCBI-ProteinID:
XP_017259110
UniProt:
A0A161ZSE0
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Position
6:4115555..4117835
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AA seq
623 aa
AA seq
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MSSGTSQKLESKEFKMECSSVVKEKEKKALEFIEYVTTNADEVQKQVLAEILAQNAGVEY
LQRHGLGGRTDADSFKKLVPAITHEDIRPDISRIANGDKSPILCSYPISEFLTSSGTSGG
ERKLIPTIEEEFDRRSFFYSLLMPVMNKHIPGLDQGKAMYFLFIKSESATPGGLRARTAI
TSYFKSTHFINRTIEEDPYMNYTSPNDTILCLDNYQSMYSQILCGLCLHKEVVRVGATFG
SVFIRAIQFLENNWPILCNDIRTGTLNPEITDQLVRDSVMKILKPDPVLADFIEAECRKK
PWKGIITRLWPNTMCIEAIVTGTLSSYVPTLEYYGHGLPLVSSFYASSEAYFGINLNPLC
KPSEVSYTLIPTMAFFEFLPVKQSDIVGDTSPYPGARSPLNEKEREELVDLIDVKLGEEY
ELVVTTYAGLYRYKVGDILQVAGFKNKAPHFHFIGRKNVALSIEADKTDEAELKRAVEKA
VINHLRPLNASLVDYTAYADKSTVPGHYVIFWEYIVHNEGSKSTNQVIPPSVFEDCCLTM
EESLDSVYRQGRVADKSIGPLEIRIVERGTFDSLMDYAISSGASMSQYKTPRSVKTAPIL
DLLNSKVVSNHYSPKCPTWAPKG
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcggaacttcacagaaattagaaagcaaggagtttaagatggagtgcagtagt
gtggtgaaggagaaggagaagaaggctctagagtttatcgaatacgtgactactaatgca
gatgaagttcagaagcaggttcttgctgaaatactagctcagaatgctggcgttgagtat
ttgcagcgtcatggccttggaggacgcactgatgctgatagtttcaagaaactagtgcct
gctatcactcatgaggatattcgacctgatatcagccgaattgctaatggtgataaatct
cccatcctgtgctcttacccgatttcagagttcttgacaagctctgggacgtctggaggc
gaaagaaaactgataccaactattgaagaagagtttgacaggaggtcatttttctatagc
ctgttgatgcctgtaatgaataagcatatccctggtctagaccaagggaaagccatgtat
ttcttgttcataaaatcagagtccgcgactccgggtggcctacgagcacgtacagccata
acaagttacttcaaaagtacacatttcataaacaggactatcgaagaagacccctatatg
aactacaccagccccaatgacactatcctctgcctagacaactaccaaagtatgtactca
cagatcttatgtggattatgcctccacaaggaagttgttcgagttggagctacatttggt
tctgtcttcatccgggccattcagtttctggagaacaactggccgatactatgtaatgac
attaggacaggaactcttaaccctgagatcacggaccaattggtgagagactcggtgatg
aaaattcttaaacccgaccccgtgttggcagattttatcgaggctgaatgtcgtaagaag
ccatggaaagggattataacaaggttgtggcctaacacaatgtgcattgaagctatagtg
actgggaccttgtcaagttatgtaccaactctcgaatattatggccatggactacctcta
gtgagctcattttatgcttcttcagaggcttattttggtattaatcttaatcctctttgc
aagcctagtgaagtttcatataccctcattcccaccatggcatttttcgaattcttgcct
gtgaaacagagcgacatagttggtgatacaagtccttacccaggggcaagatctcccctc
aacgagaaagaacgggaagaactggtcgatctcattgacgttaagcttggagaagaatac
gagcttgtggtgactacctatgctgggctgtacagatataaagtgggagacatcctacaa
gtcgctggattcaagaacaaggctccccatttccacttcattgggcgaaaaaatgttgct
ctgagcatagaagctgacaaaaccgatgaagctgagctgaaaagagcagtagagaaagcc
gtaatcaaccatttgaggccacttaacgctagtttagttgattacactgcctatgcagac
aaaagcacagttccaggacattatgttatattctgggaatatatcgtgcataacgaggga
tcaaaaagtacaaaccaagtgattccaccatctgttttcgaggattgttgtcttaccatg
gaagagtcactcgacagtgtgtaccgacaaggtcgtgtagctgataaatccatcggtcct
cttgagatcaggatagtagaaaggggaactttcgattcactgatggactatgccattagc
tcaggtgcttcgatgagccagtacaagactcctcgctctgtgaagactgcaccaattcta
gatcttttgaactccaaggttgtttccaaccactacagcccaaagtgtccaacatgggca
cctaaaggttaa
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