Daucus carota (carrot): 135148545
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Entry
135148545 CDS
T05350
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
135148545
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
135148545
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GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
MMR_HSR1
AAA_28
AAA_23
RsgA_GTPase
AAA_22
AAA_16
AAA_15
AAA_24
VapE-like_dom
MukB
Motif
Other DBs
NCBI-GeneID:
135148545
NCBI-ProteinID:
XP_063939921
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All DBs
Position
8:14489762..14494117
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AA seq
548 aa
AA seq
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MDALQISDRTCTGVLCSHPLSRDIRIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGC
GKSTLLTSIGRRELPIPEHMDIFHLTREIEASDMSSLQAVLNCDEEKLKLEKEAEALAAQ
DDGGGEALERIYERLDAMDAATAEKRAAEILFGLGFTKEMQAKKTRDFSGGWRMRIALAR
ALFMNPTLLLLDEPTNHLDLEACVWLEEMLKKFDRILVVVSHSQDFLNGVCTNIIHMQNK
QLKMYTGNFDQYVQTRSDHEENQMKQYKWEQDQIANMKEYIARFGHGSAKLARQAQSKEK
TLAKMERGGLTQKVSRDQVLVFRFVDVGKLPPPVLQFVEVSFGYTPDNLIYKNIDFGVDL
DSRIALVGPNGAGKSTLLKLMTGDLVPNEGMVRRHNHLRIAQYHQHLTEKLDLELSALVF
MIREFPGNEEEKMRSAIGRFGLTGKAQVMPMKNLSDGQKSRVIFAWLAWRQPQMLLLDEP
TNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAREIWVCEDQAVTPWAGDIMGFKA
HLKKKAGL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcttcagatttcggaccggacttgtactggtgtgctttgttcacatccgttg
tctcgagatattcgtatagagtccctgtccctaacctttcatgggcatgatcttattgtt
gattccgagctggaacttaattatggcagacgttacggtttgctcgggttgaatggctgt
ggcaaatcaactcttcttacatccatagggcgtcgagaacttccaattcctgaacacatg
gatatatttcatctcacaagggagattgaagcttctgatatgtcttcacttcaggctgtg
ttaaattgtgacgaggagaagttaaaattagagaaagaagctgaagccctggctgcccag
gatgatggtggaggagaagctcttgagcgcatatacgagcgcttggatgcaatggatgcc
gcaactgctgaaaaacgtgctgctgaaattttgtttggtcttggttttaccaaagagatg
caagcaaagaaaacccgggacttctccggtggatggcgtatgaggattgctttagcacgt
gccctgttcatgaacccaactcttttgttgcttgatgaacccactaatcatcttgattta
gaagcttgtgtctggctggaggagatgctcaagaaatttgatcgaattttggttgtggtt
tctcactcccaggacttcctgaatggtgtctgtacaaacatcatacacatgcagaacaaa
cagttgaaaatgtatactggaaactttgaccaatatgttcaaacccgttcagatcatgag
gagaaccagatgaagcagtacaagtgggagcaagatcagattgctaatatgaaggagtat
attgctagatttggacatgggtcagccaaattagctcgccaggcacagagcaaggagaaa
actttggcaaagatggaacgtggtgggctcacacaaaaagtgtctagggatcaggttctg
gtgtttagatttgttgatgtaggaaaactcccgccaccagttttacagtttgttgaagtt
tcatttggctacaccccagataacctcatctacaagaacattgactttggggtggacctt
gactcaaggatagctttggttgggcccaatggtgctgggaagagtacactcctaaagctg
atgacaggtgatttggttccgaatgagggcatggtacgtcgacacaatcacttgcgcata
gcacaatatcaccagcacttgactgagaaacttgacttggagctgtcggctcttgttttt
atgataagagagttcccaggtaatgaggaagagaagatgaggtcagcaatcgggaggttt
ggactaacaggtaaagctcaggtgatgccaatgaaaaacttgtcagatggacaaaagagt
cgtgtgatttttgcatggttggcatggagacagccccagatgttgctgctggatgagcca
actaatcatttggatatcgagactatagactcgcttgctgaggctttgaacgagtgggac
ggtggcttggttcttgttagccatgatttcaggctcataaaccaggtggctcgtgaaatt
tgggtgtgtgaagatcaagctgtgaccccatgggcgggtgatatcatgggatttaaggcg
cacttgaagaagaaagctggcctataa
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