Daucus carota (carrot): 88614268
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Entry
88614268 CDS
T05350
Symbol
rbcL, V9627_pgp059
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00630
Glyoxylate and dicarboxylate metabolism
dcr00710
Carbon fixation by Calvin cycle
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
dcr01200
Carbon metabolism
Module
dcr_M00165
Reductive pentose phosphate cycle (Calvin cycle)
dcr_M00532
Photorespiration
dcr_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
88614268 (rbcL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
88614268 (rbcL)
Enzymes [BR:
dcr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
88614268 (rbcL)
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
88614268
NCBI-ProteinID:
YP_011069439
UniProt:
A0A175YD33
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Position
Pltd:55564..56991
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AA seq
475 aa
AA seq
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MSPQTETKAGVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQFIAYVAYPLDLFEEGSVTNMFTSI
VGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYL
NATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFIEKDRSR
GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
RVALEACVQARNEGRDLAREGNEIIREATKWSPELAAACEVWKEIKFEFEAMDTL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccacaaacagagactaaagcaggtgttggattcaaagctggggttaaagattac
aaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattc
cgagtaactcctcaacctggagttccacctgaagaagcgggagccgcggtagctgccgaa
tcttctactggtacatggaccactgtgtggaccgatggacttaccagtcttgatcgttac
aaagggcgctgctacggaatcgagcccgttgctggagaagaaaatcaatttatcgcttat
gtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttctatt
gtaggtaatgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatt
cctgttgcttatgttaaaactttccaaggaccgcctcatggcatccaagttgagagagat
aaattgaacaagtatggtcgtcccctgttgggatgtactattaaacctaaattgggatta
tccgctaaaaactacggtagagcggtttatgaatgtctccgcggtggacttgattttacc
aaagacgatgagaatgtgaactctcaaccatttatgcgttggagagatcgtttcttattt
tgtgccgaagcaatttataaagcacaggctgaaactggtgaaatcaaagggcattacttg
aacgctactgcgggtacatgtgaagaaatgatgaaaagggctatatttgccagagaattg
ggagttcctatcgtaatgcatgattacttaacagggggattcactgcaaatactagctta
gcccattattgccgagataatggcctacttcttcacatccaccgcgcaatgcatgcagtt
attgatagacagaagaatcatggtatacactttcgtgtactagctaaagcgttacgtatg
tctggtggagatcatattcactccggtaccgtagtaggtaaacttgaaggggaaagagac
atcactctgggctttgtcgatttactgcgtgatgattttattgaaaaagatcgaagtcgc
ggtatttatttcacccaagattgggtctctctaccgggtgttctacccgtggcttcggga
ggtattcacgtttggcatatgcctgctctgaccgagatctttggggatgattcggtacta
cagttcggtggaggaactttaggacacccttggggaaatgcacccggtgccgtagctaat
cgagtagctctagaagcatgtgtacaagctcgtaatgaggggcgtgatcttgctcgtgaa
gggaatgagattatccgtgaggctactaaatggagccctgaactagctgctgcttgtgaa
gtatggaaggagatcaaatttgaatttgaagcaatggataccttgtaa
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