Dyella caseinilytica: ISN74_04025
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Entry
ISN74_04025 CDS
T07062
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
dcs
Dyella caseinilytica
Pathway
dcs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ISN74_04025 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcs03400
]
ISN74_04025 (uvrB)
DNA repair and recombination proteins [BR:
dcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ISN74_04025 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ISN74_04025 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Kinesin
DUF87
Motif
Other DBs
NCBI-ProteinID:
QRN54544
UniProt:
A0ABX7GVR0
LinkDB
All DBs
Position
996199..998235
Genome browser
AA seq
678 aa
AA seq
DB search
MTDRDRFELVSHYKPAGDQPEAIRRLVEGFEAGLAAQTLLGVTGSGKTFTIANMIEQVQR
PTIVLAPNKTLAAQLYGEFKEFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEH
IEQMRLAATKALLSRKDAIIVATVSAIYGLGDPEDYLSLRLILARGERIDQRALIRQLTE
LQYTRNEMELRRGTYRVRGEIIDVFPAESETEALRIELFDGEVENLSLFDPLTGEAIRKV
PRYTVYPRTHYASTRESVLNAIETIKEELKDRLEYLYKENRLVEAQRLDQRTRFDIEMMT
EVGYCQGIENYSRHLTRRAPGEPPPTLFDYLPPDALLVVDESHVTIPQLGAMYKGDRSRK
ETLVEFGFRLPSAMDNRPLRFEEFERRAPRSIYVSATPRAYELEKSGDAVVELVVRPTGL
IDPEVEVRPVRTQVDDLLGEAKKRIAMGDRVLVTTLTKRMAENLTEYLSEHDVKVRYLHS
DIETVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQT
IGRAARNERGKAILYGDEITRSMRAAMDETSRRREKQVAWNTAHGITPKSVVRRIADIME
GARSEVPGRSRSKSTRGRGAAALVAEEAADYAGLSADQASAMIKRLEADMRKHAENLEFE
EAARLRDRIHQLREQAAR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgcgaccgcttcgaactcgtatcccactacaaaccggccggcgatcagccc
gaggcgattcgtcgcctggtggaaggcttcgaagccggcctagcggcgcagaccctgctc
ggcgtgacgggctcgggcaagaccttcaccatcgccaacatgatcgagcaggttcagcgc
ccgaccattgtgctggcgccgaacaagacgcttgcggcgcagctgtacggcgagttcaag
gagtttttcccgcacaacgcggtggagtacttcgtcagctattacgactactaccagccg
gaagcctacgtcgtcgcgtcggataccttcatcgagaaagacgcgtcgatcaacgagcat
atcgagcagatgcgattggccgcgaccaaggcgctgctttcgcgcaaagacgcgatcatt
gtcgcgaccgtctcggcgatctacggcctgggcgatccggaagactatctttcgctgcga
ttgatcctcgcccgcggcgagcgtatcgaccagcgcgccttgattcgccaacttaccgaa
ctgcaatacacccgcaacgaaatggaactgcgtcgtggcacctatcgcgtgcgcggcgag
atcatcgatgtatttccggccgaatcggaaaccgaggcgctgcgtatcgagctattcgac
ggcgaagtggaaaatctgtcgttgttcgatccactcaccggtgaagcgatccgcaaggtt
ccacgctataccgtctacccacgcacgcattacgccagtacgcgcgaaagtgtgttgaac
gcgatcgaaaccatcaaggaggagttgaaggaccgactcgaatatctctacaaggaaaat
cgtctggtggaggcgcagcgactcgatcaacgcacccgcttcgacatcgagatgatgacc
gaggtgggctattgtcagggcatcgagaactactcgcggcatctgacccgccgcgcgccc
ggtgaaccgccgccgacgctgttcgactatctgccacccgatgcattgctggtcgtagac
gaatcgcacgtaacgattccgcagctgggtgccatgtataaaggcgaccgttcgcgcaag
gaaaccctggtggaattcgggttccggctaccgtcggcaatggataaccgtccgttgcgt
ttcgaggagtttgaacgtcgtgcgccgcgttcgatctatgtctctgcaacgccgcgtgct
tatgagctggaaaagtctggtgatgcggtagtggagctggtcgtgcgccccaccggcttg
attgatccggaagtggaagtgcgcccggtgcgcactcaggtggacgatctgttgggcgag
gcaaagaagcgcattgccatgggcgaccgcgtactggtcaccacgctcaccaagcgcatg
gcggaaaacctcaccgaatacctcagcgaacacgatgtgaaagtgcgttatctgcactcg
gacatcgaaaccgtggagcgcgtggaaatcatccgcgacttgcgcctgggcgaattcgat
gtgctggtcggcatcaacctgttacgcgaaggtctggatatgcccgaggtctcgctggtg
gcgatcctcgatgcagacaaggaaggcttcctgcgttccaccggctcgctgatccagacc
atcggccgtgcggcgcgcaacgagcgtggcaaagccatcctgtacggcgacgagatcacc
cgctcgatgcgagcagcgatggatgaaaccagccgtcgccgtgaaaagcaggtggcctgg
aatactgcacatggcatcaccccgaagtcggtggtgcgccggatcgccgacatcatggaa
ggtgcccgcagcgaggtgccaggccggagccgcagcaagtccacccgcggccggggcgct
gccgccctggttgccgaggaggccgccgattacgccggtctcagcgccgaccaggcttcc
gccatgatcaagcggctggaggcggatatgcgcaaacatgcagaaaatctggagttcgag
gaagctgcccgtctgcgcgaccggatccatcagcttcgcgaacaggctgcgcgctaa
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