Dyella caseinilytica: ISN74_04365
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Entry
ISN74_04365 CDS
T07062
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
dcs
Dyella caseinilytica
Brite
KEGG Orthology (KO) [BR:
dcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcs03021
]
ISN74_04365 (rapA)
Transcription machinery [BR:
dcs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ISN74_04365 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
Tudor_RapA
DEAD
Flavi_DEAD
AAA_34
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QRN55775
LinkDB
All DBs
Position
complement(1068248..1071088)
Genome browser
AA seq
946 aa
AA seq
DB search
MFVPGQRWISTAEPELGLGTVLRVEGRGVQVLFAKSGVLRPYAVDSAPLVRAEFRAGQRV
AGKGIAFLVERIEEQEGLLVYRGEGRELHEGQLDDEQSVSQADDRLIGGRTDPVHHFELR
LEGLKRRADARRSASWGLGSARIGLVPHQLRVAAIAASRHPPRVLLADEVGLGKTIEAGM
VIARQIATGRASRVLVLLPDTLVYQWFVELLRRFNLSFAIYDEERCEAVEQSDSGHNPFD
DEQLVIADFSFLEHSPKRASQLLDARWDLLVVDEAHHLAWTPEEASPRYTLVEQLAAATP
GVILLTATPEQLGRSGHFARLRLLDPQRYHDLNAYLAESERFQSLSHIADKLLERTPLEA
GELKQLHQAFESDATLQGYLADTTKPEHSRELLAALIDRHGTGRSMFRNRRAGIGGFPQR
LPVWELIETDRQDDNTRQALLAEFHADLQQPVPVLEVDYSNDPRIDTLVALLERYPQDKF
LLICRSQAKVLALEEALRTRTGAGIARFHEGLGIIQRDRNAAYFAQADGARLLICSEIGS
EGRNFQFAHRLILWDLPLDPDLLEQRIGRLDRIGQKHDISIHIIAVANSAQHVLARWYDE
GVDAFRTSPADGRELLRRFGEPLARLADEHARGDDLRDQELDVLLAETRASHEQMAELIR
AGRDHLLELAASRDLHADELAQAFRREDDDPSRDAFQQRLLESFGIHAEELGGKVVLLDP
QYLSTDALPGFAEGPQSITFSRDVALSREDLPLLRLDHPMILAALDLALSSERGNAGFMV
DDALPPRNALLQAVYVLECVAERSLDAERFLPTQPIVVTIDTKLTERANFQPGDASIRKA
GDRTIEVARYRKFLAKLVPPMLEKAEAAAALRAQGSIADAVNEARDTLDAELARLRALQS
INLSISEAEVTHVEEERSALLSALPQARLRLDAVRFVVSADFLALR
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtacccggtcaacgctggatctccactgccgagcccgagctcggcctcggcact
gtgctgcgcgtcgaagggcgcggggtgcaggtgctgtttgccaaatcgggggtcctgcgc
ccttatgcggtcgattccgcaccgctggtgcgcgccgaattccgcgctgggcagcgggtg
gccggtaagggcatcgcctttctggtggagcggatcgaggagcaggaagggctgctggtc
tatcgcggcgagggccgcgagctgcacgaagggcagttggatgacgagcaaagcgtcagt
caggccgatgatcggttgatcggtggtcgtaccgatccggtgcatcatttcgagctgcgc
ctggaagggctgaagcgccgcgctgatgcgcgccgctcagccagttgggggcttggttcg
gcgcgtatcgggctggtgccgcatcagttgcgtgtggccgcgattgccgcatcgcgccat
ccaccacgggtgttgctggctgatgaagtcggcctgggcaagaccatcgaggccggcatg
gttattgcccgccagatcgctaccggccgcgcgtcacgcgtgttggtgttgctgccagat
acgctggtttaccagtggttcgtcgagttgctgcgtcgcttcaacctcagctttgcgatc
tacgacgaagagcgctgcgaggcggtggagcaatccgacagcggccacaacccatttgat
gacgaacaactggtcatcgccgatttcagcttcctcgaacatagccccaagcgcgccagc
caattgcttgatgctcgctgggatctgctggtggtggacgaagcccatcatctggcctgg
acgccggaagaagccagcccgcgttacaccctggtcgagcagctcgccgccgccacgccg
ggcgtcatcctgctgacggcgacaccggaacagctgggacgcagcggccatttcgcgcga
ctgcgcctgctcgatccgcagcgctatcacgacctgaacgcctatttggccgaatccgaa
cgcttccagtcactttcacacattgccgacaagctgctggaacgcacaccgttggaagct
ggcgagctgaagcagctgcatcaggccttcgagagcgatgcgacgctacaaggctacttg
gccgacaccaccaagcccgaacacagccgcgaactgctggccgcgctgatcgatcgccac
ggcaccggccgctcgatgttccgcaatcgccgcgccggcatcggcggttttccgcagcgc
ttgccggtatgggaactcatcgaaaccgatcgccaggacgacaacacgcgccaagcgctg
ctcgccgaattccatgctgacctccagcagcctgttccggtgctggaggtggattacagc
aatgacccacgtatcgatacgctggtcgcgctgctggagcgttatccgcaagacaaattc
ctgctgatctgccgcagccaggccaaggtgcttgccctggaagaggcgctgcgcacgcgc
accggtgccggcatcgcccgtttccatgaaggcttgggcatcatccagcgcgaccgcaat
gccgcttattttgcgcaagccgacggtgcacgcctgctgatctgttcggagatcggttcg
gaaggccgcaacttccagttcgcgcaccggctgatcttgtgggatctcccgctcgatccc
gacctgctggaacaacgcatcggccgactggaccgtatcggtcagaaacacgacatcagc
atccacatcatcgccgttgctaacagcgcgcagcatgtgctcgcccgctggtacgacgaa
ggcgtggatgccttccgcaccagtcccgcggatggccgcgagttgctacgtcgcttcggt
gagcccttggcacggctggccgacgaacacgcgcgcggcgatgatctgcgcgatcaggaa
ctggatgtgttgctggccgaaacgcgcgccagccacgaacagatggccgaattgattcgc
gccggccgcgatcatttgctggaactcgccgccagccgcgatctgcatgcggacgaactg
gcccaggcattccgccgcgaagacgatgatccgtcgcgcgacgccttccagcagcgcctg
ctcgaatccttcggcattcacgccgaagaactcggtggaaaagtcgtgctgctcgatccg
caatacctgtccaccgacgccctgcccggcttcgccgaaggtccgcaatccatcaccttc
tcgcgcgatgtagcactctcccgcgaagatcttccgctgttgcggctcgatcatccgatg
atcctggccgcactcgatctcgcgctttccagcgaacgcggcaatgccggcttcatggtc
gatgacgcgttaccgccacgcaacgcactgttgcaagcggtctatgtgctcgaatgcgtg
gccgaacgcagccttgacgccgaacgtttcctgcccacgcagccgatcgttgtcacgatc
gacaccaagctcactgaacgcgccaacttccagccgggtgatgcgtctatccgcaaggcg
ggcgatcgcaccattgaagtggcgcgttatcgcaaattcctcgccaagctggtgccgccg
atgctggagaaggctgaagccgctgcagcgttgcgcgcacaaggtagcattgccgatgcc
gttaacgaagcgcgagacacattggacgctgaattagctcgcctgcgtgcgctgcaatcc
atcaatctgtcgatcagcgaggccgaagtcactcacgtcgaggaagaacgctctgcgctg
ctcagtgcattgccgcaggcgcggctgcgattggatgccgtgcgttttgtggtcagtgcg
gatttcttggcgctgcgctga
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