Dyella caseinilytica: ISN74_07035
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Entry
ISN74_07035 CDS
T07062
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dcs
Dyella caseinilytica
Pathway
dcs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ISN74_07035 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcs03019
]
ISN74_07035 (pnp)
03016 Transfer RNA biogenesis [BR:
dcs03016
]
ISN74_07035 (pnp)
Enzymes [BR:
dcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ISN74_07035 (pnp)
Messenger RNA biogenesis [BR:
dcs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ISN74_07035 (pnp)
Transfer RNA biogenesis [BR:
dcs03016
]
Prokaryotic type
tRNA degradation factors
ISN74_07035 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QRN55086
UniProt:
A0ABX7GX99
LinkDB
All DBs
Position
1634355..1636460
Genome browser
AA seq
701 aa
AA seq
DB search
MAKVTKSFQYGNHEVTLETGEIARQASGAVMVSMGGTVVLVSVVAAAKAKDGQDFFPLTV
DYVEKFYSAGRIPGGFFKREGRPTEKETLTSRLIDRPVRPLFPEEFKNEVQVIAQVVSLN
PEIDGDIAAMIGASAALTLAGIPFKGPIGAARVGYANGQYLLNPTVSELKTSDLDLVVAG
TANAVLMVESEAKLLSEEVMLGAVVFGHQQMQVVIKAINDFAAEAGRKPFGWTAPTRNDA
LFNDIQGILGDRLEKAFAIRDKLERRDAISALKSDIKTGIAETAASHGWSDLDISNAFAE
IEYRTMRDGVLKTKIRIDGRKLDDIRPISVRVGVLPRTHGSALFTRGETQALVVATLGTT
RDAQIIDAPEGESKDAFLFHYNFPPFSVGETGRFGAPKRREIGHGRLAKRGVQAVKPSIE
EFPYVLRVVSEITESNGSSSMASVCGSSLAMMDAGVPLKAPVAGIAMGLVKEGSDFVVLS
DILGDEDHLGDMDFKVAGSADGISALQMDIKIEGITEEIMKIALEQAKHGRLHILGEMAK
VISTPRSEMSEYAPRLLTIKIHPDKIREVIGKGGATIRSITEETGTTIDISDDGTVIIAS
VNRLAADEAKKRIDQIVSDVEPGRIYEGKVAKLMDFGAFVTILPGKDGLVHVSQISNERV
EKVSDKLKEGDIVKVKVLEVDKQGRIRLSMKAVAEDEGASA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagtaaccaagtcattccagtacggtaatcacgaagtcacactggagacgggc
gaaattgcccgccaggcttcgggcgccgtcatggtcagcatgggcggcaccgtcgtgctc
gtttccgtggtggctgcggccaaggcgaaagatgggcaggatttcttcccgctcaccgtc
gactacgtcgagaagttctactccgccggtcgtattccgggcggcttcttcaagcgtgaa
ggtcgcccgaccgagaaggagacgctcacctcgcgtctgatcgatcgcccggtgcgcccg
ctgttcccggaagagttcaagaacgaagtgcaggtcatcgcgcaggtcgtttcgctgaac
ccggaaatcgacggtgacatcgctgcaatgatcggtgcctctgctgcgctgacgctggcc
ggtatcccgttcaagggcccgatcggtgccgcgcgcgttggttacgccaacggccagtac
ctgctgaatccgaccgtttcggagctcaagacgtccgatctggatctggttgtcgccggc
accgccaacgccgtgctgatggtggaatccgaagccaagctgctcagcgaagaagtgatg
ctgggtgcggtggtgttcggtcaccagcagatgcaggtggtgatcaaggccatcaacgac
ttcgccgccgaagccggccgcaagccgttcggatggaccgctccgacgcgcaacgatgcg
ctgttcaacgacatccagggcatccttggtgatcgtctggagaaggctttcgcgatccgc
gacaagctggagcgccgtgacgccatctccgcactgaagagcgacatcaagacgggtatc
gccgaaaccgccgcttcgcacggctggagcgatctcgatatcagcaacgcgtttgccgaa
atcgaataccgcaccatgcgcgatggcgtgctgaagaccaagatccgtatcgacggccgc
aagctcgacgacatccgcccgatctccgtgcgcgtgggcgtgctgccgcgtacccacggt
tcggcactgtttacccgcggtgaaacccaggcgctggtcgtggccaccctcggcactacg
cgtgacgcgcagatcatcgatgcgccagaaggcgagtcgaaggatgcgttcctgttccat
tacaacttcccgccgttctcggtgggtgaaaccggtcgtttcggtgcgccgaagcgccgc
gagatcgggcatggtcgccttgccaagcgcggtgtgcaggccgtcaaaccgagcatcgaa
gaattcccgtacgtgctgcgcgtggtttcggaaatcaccgaatcgaacggctcctcctcg
atggcgtcggtgtgcggctcctcgctggccatgatggatgccggtgtgccgctgaaggca
ccggtggcgggtatcgccatgggcctggtgaaggaaggcagcgactttgtcgtgctgtcg
gacatcctgggcgacgaggatcacctcggcgacatggacttcaaggtggccggtagtgcc
gatggcatctccgcgctgcagatggacatcaagatcgagggcatcaccgaggagatcatg
aagatcgccttggagcaggccaagcatggtcgtctgcacatcctgggcgaaatggccaag
gtgatcagcacgccgcgttcggaaatgagcgaatacgcaccgcgcctgctcaccatcaag
atccacccggacaagatccgcgaagtgatcggcaagggtggcgccaccatccgctccatc
actgaagaaaccggcaccaccatcgacatcagcgacgacggcaccgtgatcatcgcctcg
gtcaaccgcctggcggcggacgaagcgaagaagcgtatcgatcagatcgtttccgatgtc
gagccgggtcgcatctacgaaggcaaggtcgccaagctgatggacttcggtgccttcgtg
acgatcctgccgggcaaggacggtctggttcacgtgtcgcagatctccaacgagcgcgtc
gagaaagtctccgacaagctcaaggaaggcgatatcgtcaaggtcaaggtgctggaagtg
gacaagcagggccgtattcgcctgtccatgaaggccgtcgccgaggacgaaggcgccagc
gcctga
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