Dyella caseinilytica: ISN74_07460
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Entry
ISN74_07460 CDS
T07062
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dcs
Dyella caseinilytica
Brite
KEGG Orthology (KO) [BR:
dcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcs03009
]
ISN74_07460 (rlmD)
Enzymes [BR:
dcs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ISN74_07460 (rlmD)
Ribosome biogenesis [BR:
dcs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ISN74_07460 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
MTS
RrnaAD
PCMT
Methyltransf_11
Cons_hypoth95
Met_10
Methyltransf_23
Methyltr_RsmB-F
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QRN55157
LinkDB
All DBs
Position
1719459..1720772
Genome browser
AA seq
437 aa
AA seq
DB search
MNEFEAPITDLSHDGRGVARIDGKTVFVSGALLGEQVRLKIRKRHRHFDEAETLQIITPS
PHRVEPRCPHFGQCGGCSLQHLDAASQIEAKQRVLVDNFARIGKVEPESWLPPLTDEAWG
YRRKGRLSVRAVAKKGRVLVGFREESNPRFVADITRCEVVHPAIGTKIGLLGELVGGMDA
AADIAQIEFAAGDDTVALVFRHLKPLSEGDRAKLITFAQEHGFAIYLQPGGISSVHPLWP
ENPRLAFRVPAGDGLDDVELEFQPLDFVQVNAGMNRRMMAHALELLDPQPTDHVLDLFCG
LGNFTLPLARRVAEVTGVEGEHGLVARAAENAARNSITNANFHVANLFEDQRGTEWARKP
WDKLLLDPPRAGADKVLEYLPHKETSRIVYVSCHPASLARDAGILVNQHGFRLVSAGVMD
MFPHTAHVESIALFERS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttcgaagcccccattaccgatttgagtcatgacggccggggcgttgcccgc
atcgacggcaagacggtgttcgttagcggcgccttgcttggcgaacaggtgcgcttgaag
atccgcaagcgccatcgccatttcgatgaagctgaaacgctccagatcatcacgccatca
ccgcaccgggtggagccacgttgcccccattttggtcaatgcggcggctgttcactgcaa
cacctggatgcggcttcgcagatcgaagccaagcagcgcgtgctggtagacaactttgcc
cgtatcggcaaagtggaaccggaaagctggctgccgccgctgaccgacgaagcctggggc
tatcgacgcaagggccgcttgtcagtgcgtgccgtggcgaaaaaaggtcgcgtactggtg
ggttttcgcgaggaaagtaatccgcgcttcgtcgccgacatcacgcgctgtgaagtcgta
catcctgccattggcacaaagattggcctgctgggtgaactggttggcggcatggatgct
gctgccgatatcgcgcagatcgaatttgccgcaggcgacgatacggtggccctggttttc
cgtcatctcaagccgttgagtgaaggtgatcgcgccaagctgatcaccttcgcgcaagag
catggctttgctatctatctgcagcccggcggcatcagcagcgtgcatccgctatggccc
gaaaatccgcgcctcgcattccgcgttcctgcgggcgatggcttggacgacgtcgagctg
gaattccagccgctcgatttcgtgcaggtcaacgcgggcatgaaccgtcgcatgatggcg
catgcgctggaactgctggatccgcaaccgactgatcacgtgcttgatctgttctgcggt
ctcggtaatttcaccttgccgttggcgcgccgcgtggccgaagtgacgggcgtggaaggt
gagcatggtctggttgcacgggcagccgaaaacgctgcgcgaaacagcattaccaatgca
aacttccatgtcgccaacctgttcgaagaccagcgcggcaccgagtgggcacgcaagcca
tgggacaagctgctgcttgatccgccccgcgcgggcgctgacaaggtgctggaatacctg
ccgcacaaggaaaccagccgtatcgtctatgtttcgtgccatccggcttcgttggcccgc
gatgccggcatcctggtcaaccagcatggtttccggctggtgtcggccggggtgatggat
atgttcccgcatacagcgcatgtcgaatcgatcgcgctgttcgagcgcagctag
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