Dyella caseinilytica: ISN74_08190
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Entry
ISN74_08190 CDS
T07062
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
dcs
Dyella caseinilytica
Pathway
dcs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ISN74_08190 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcs03400
]
ISN74_08190 (sbcB)
Enzymes [BR:
dcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
ISN74_08190 (sbcB)
DNA repair and recombination proteins [BR:
dcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ISN74_08190 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ISN74_08190 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ISN74_08190 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QRN55293
UniProt:
A0ABX7GZC9
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All DBs
Position
complement(1857485..1858930)
Genome browser
AA seq
481 aa
AA seq
DB search
MQTLFWHDYETFGTDARRDRPVQFAGIRTNLELEIIDEPVMFYGKPPHDMPPGPISCLIT
GITPQKAEHEGLIEADFAARVHEQLAAPGTCGVGYNSLRFDDEFSRQLFYRNFFEPYARE
WENGNSRWDLIDLVRMCAALRPEGIVWPTHEDGALSFKLEHLATANHLQQERAHDALSDV
HALIDLARLIRVRQPRLWDWHYALRRKQRVFELLDVTNMTPLVHVSSRYPASRRCLAVIV
PLAVHPSRSGEIIVYDLAQDPTDLLTLDAEDIADRMFTPRADLPEGVERIPLRTVHANRS
PALAPLSVLKGVDMERLQLDLDRCLAHADTLRAATGLGEKLRRVFQQAADLPPPEDPELA
LYSGFLPDADKRLLREVRATPAEQLAQRAFGFRDPRYAELLFRYRARNWPDTLTPDERAR
WEHFRIERLTRPTPLTLLTLADYFEQLTALRNDPAQSDKLALLDQLQAWGEQLAAEAGIA
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccctcttctggcacgactacgaaaccttcggcacggacgcgcggcgggatcgt
cccgttcaatttgccggcatccgcaccaatctggagctggagatcatcgacgaaccggtg
atgttctacggcaaaccgccgcacgacatgccgcccggccccatctcttgcctgatcacc
ggcattacaccgcaaaaggccgagcatgaaggcctgatcgaagcggacttcgccgcacgc
gtgcacgagcagctggcggcgcctggcacctgcggcgtgggctacaactcgctgcgcttc
gatgacgaattctcgcggcagctgttctaccgtaactttttcgaaccctatgcacgcgaa
tgggaaaacggcaattcgcgctgggatctgatcgatctggtgcggatgtgcgccgcactg
cggccagagggtattgtctggccgacgcatgaggacggcgcgctgagcttcaaactggag
cacttggctaccgccaatcatctgcagcaggaacgcgcgcacgatgccttgtcggacgtg
catgcgctgatcgatctggcacggctgattcgcgtacgtcagccgcggttgtgggactgg
cactacgcattgcgccgcaaacagcgcgtgttcgagctgctcgacgtcaccaacatgacg
ccactggtacatgtgtcctcgcgctatcccgccagccgacgctgcctggccgtgatcgtg
ccgctggccgtgcatccaagccgatcaggtgaaattattgtgtacgacctggcgcaggat
ccgaccgatctgctcacgcttgacgctgaagacatcgccgatcggatgtttacgccgcgc
gccgatctgcccgagggcgtggaacgcattccgctgcgcaccgtgcatgccaaccgttcc
cccgccctggcgccgttgtcggtgctcaaaggcgtggatatggagcgcttgcagttggac
ctcgatcgttgccttgcgcatgccgacaccctacgtgctgcaacgggattgggcgagaag
ctgcgtcgcgtctttcagcaggcggccgacctgccgccgccggaagaccctgaactcgcg
ttgtacagcggcttcctgcccgacgccgacaaacgcctgttgcgcgaagtgcgcgccacg
ccggccgagcaactggcgcagcgcgcgtttggtttccgtgacccgcgctatgccgaactg
ttgttccgttatcgcgcccgcaattggcctgataccttgacgcccgatgagcgcgcgcgc
tgggagcatttccgcatcgaacgcctcacacgccctaccccgctgaccttattgacgctg
gccgattacttcgagcagcttaccgccttgcgcaacgaccccgcgcaaagcgataaattg
gcactcctggaccagttgcaggcctggggcgaacagctcgccgccgaggccggtattgcc
gcctga
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