Dyella caseinilytica: ISN74_11820
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Entry
ISN74_11820 CDS
T07062
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dcs
Dyella caseinilytica
Brite
KEGG Orthology (KO) [BR:
dcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcs03009
]
ISN74_11820 (rimO)
Enzymes [BR:
dcs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ISN74_11820 (rimO)
Ribosome biogenesis [BR:
dcs03009
]
Prokaryotic type
ribosomal protein modification factors
ISN74_11820 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
QRN52185
LinkDB
All DBs
Position
complement(2746032..2747351)
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AA seq
439 aa
AA seq
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MSKATQKIGFVSLGCPKALVDSERILTQLKVEGYEIVPTYGAADAVVVNTCGFIDAAVQE
SLDAIGEALHENGKVIVTGCLGKRSELIREAYPDVLAITGPQDYSSVMNAVHSALPPKRN
RLLDIIPDTGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLIEAEKLAK
GGVKELLVISQDTSAYGVDIKYAERTWREKSYRTRMTELCEGLSELGVWTRLHYVYPYPH
VDEIMPLMAEGKILPYLDIPFQHASPRILKLMKRPGNIDKTLERIQNWRKLVPDLTLRST
FIVGFPGETDAEFEELLDFLREAELDRVGAFTYSPVDGAKANELPDPVSEELKEDRLEQF
MAVQAEISAAKLQRKIGRTIKVLVDEAGVDGAVARSAADAPEIDGVVRIANGQALKPGQF
VDVVVEAADEHDLHASLVN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggccacccagaaaatcggttttgtcagcctcggctgccccaaggcgctggtc
gattcggagcgcatccttacccagctgaaggtcgaggggtatgagatcgtgcctacttac
ggcgcggctgatgcggtggtggtgaatacctgcggctttatcgatgcggccgtgcaggag
tcgctggatgccattggcgaggcgctgcatgagaacggcaaggtgattgtgaccggctgc
ctgggtaagcgttcggagctgatccgtgaggcttatccggacgtgctcgcgattaccggg
ccgcaggattacagcagcgtgatgaatgcagtgcattcggcgttgccgcccaagcgcaat
cggctgttggacatcattccggatacgggcatcaagctcacgcccaagcattatgcgtat
ctgaagatttccgagggctgcaatcatcgctgcagtttctgcatcattccgtcgatgcgc
ggtgatctggtttcgcgtccagtcgacgaggtactgatcgaagccgaaaagctggcgaag
ggcggcgtaaaggaattgctggtgatctcacaagacaccagcgcttatggcgtggatatc
aaatacgccgaacgcacctggcgcgagaagagttaccgcacgcgcatgactgagctgtgc
gaaggcttgtctgaacttggcgtgtggacacgtctgcattacgtgtatccgtacccgcat
gtggacgagatcatgccactgatggcggaagggaagatccttccgtatctcgatattccg
ttccagcacgccagcccgcgcatcctcaagctcatgaagcgtccgggcaatatcgacaag
acgctggagcgcattcagaactggcgcaagctggtgccggatctcaccttgcgcagcacc
tttatcgtcggttttccgggcgagacggatgcggagttcgaagagttgctcgacttcctg
cgtgaagccgaactggatcgtgtgggcgcctttacctattcaccggtggacggtgcaaag
gccaatgagctacccgacccggtttctgaggaattgaaggaagatcgcctggagcagttc
atggcggtgcaggcggaaatctccgccgccaaactgcagcgcaagatcggccgcacgatc
aaggtgctggttgatgaagccggtgttgatggcgcggtggcgcgttcggccgctgatgcg
ccagagatcgatggcgtggtgcgcattgccaatggacaggctctgaagccgggccagttc
gtcgacgtggtggtggaagcagccgacgaacacgatctgcacgccagcctggtcaactga
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