Dyella caseinilytica: ISN74_12025
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Entry
ISN74_12025 CDS
T07062
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dcs
Dyella caseinilytica
Pathway
dcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ISN74_12025 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcs03400
]
ISN74_12025 (recD)
Enzymes [BR:
dcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ISN74_12025 (recD)
DNA repair and recombination proteins [BR:
dcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ISN74_12025 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_28
DUF7465
Pif1_2B_dom
Mg_chelatase
UvrD_C
DUF3322
T2SSE
Fucosidase_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QRN52219
UniProt:
A0ABX7GP74
LinkDB
All DBs
Position
2790493..2792469
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AA seq
658 aa
AA seq
DB search
MSHKAMLTMLTDAVERHWLRPLDLAFAQFLSERDPQADSRLLLLAALTSRLLGDGHPCLD
LNALEALAAEHTWPSHWLDLLADISLSESPLLARSDGMPANAPLVLDRHRLYLRRYWRYE
CDVAQEILARLSSRPVDEERLQTELQHLFPTLRASHIEWPRVACALSLRGGFSVMTGGPG
TGKTTTVVRLLGLLQTLQWRQQAAPLRIRLAAPTGKAAARLNASIARQIAQLDVDESVRK
AIPQQVETLHRLLGARPDSRRYTHDRRRPLHLDVLVIDEASMIDLEMMAAVLEALPSHAQ
LILLGDKDQLSSVEAGSVLGDLCRRAETGHYTPAVADWLRKISGDDIEAFVRNDAQALDQ
HIAMLRHSHRFGATSGIGRLAAAVNAGHIEEVHALLASRSGDIAWLSTDAERTPLATIAM
DGDTDRFDLDASGATPQGFRFYLQRLRELRPGSSEDVVAHQAWAHNVLEAFNHFQLLCAV
RQGPAGTERLNREIASSLHAAGWTESDRGWYEGRPVMMIRNDYSLGLMNGDVGITLRMPG
SDGVVRLYVAFPVTRAPQATSGQEESAHVRCVLPSRLGDVETVYAMTVHKSQGSEFEHTA
LVLPEEESLILTRELLYTGITRARRWLTLVGTPGSIEQALAQRTRRYSGLTERLLHQP
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcataaggcgatgctcacgatgttgaccgatgccgtcgaacggcattggctacga
ccgctcgatctggcctttgcgcagttcctcagcgagcgcgatccgcaggccgactcgcgc
ctgttgcttttggcggcgctgaccagccggctgcttggcgatggccatccgtgcctggat
ttgaacgcgctggaggcacttgctgcagaacacacctggccgtcccattggctggacctt
ctcgcagatatttcactctctgaatcgcctttgctggcgcgttccgatggcatgcctgcg
aatgctccgttggtcctggatcggcaccgactttatctccgccggtattggcgctatgaa
tgcgacgtagcacaggaaattcttgccagattgtcatcccgtcctgtcgatgaagaacgc
ttgcagacggagttacaacacttgttccctacccttcgtgcaagtcacatcgagtggccg
cgcgtagcctgtgcgctatcgttgcgtgggggcttcagtgtcatgacgggtggaccaggc
acgggcaaaacgaccacggtcgtgcgcttactcggcttgttgcaaaccttgcaatggcgc
cagcaagccgccccattgcgcatcagactggcagcaccgactggcaaggctgccgcccgg
ctgaatgcatccatcgcccgtcaaatcgcacaactggacgtggatgagtcagtacgcaaa
gccattccgcaacaggtggaaacgctacatcgcttgctaggtgcgcgccccgacagccgc
cgttacacacacgatcgccgtcgaccgctgcatctggatgtactggtgatcgatgaagcc
tcgatgatcgacctggaaatgatggcagccgtactggaagctttgccctcacatgcccag
ctgattcttcttggtgacaaagaccagctctcgtcggtggaagccggttccgtactcggc
gatctatgccgccgcgcagaaacgggccattacacaccagccgtggcagattggcttcgg
aaaatcagtggcgacgacattgaagctttcgtgcgcaacgacgcacaggcgctggatcag
catatcgccatgttgcgtcacagccatcgtttcggtgccaccagtggcatcggacgactg
gccgccgcggtcaatgccggtcatatcgaagaagtgcatgctttactggcgtcacggtct
ggtgatatcgcatggctatccaccgacgcggagcgcaccccgttggcaaccatcgctatg
gatggcgatacggaccgctttgatctcgacgcatccggcgcgacgccacaaggctttcgc
ttctatctccagcgcctgcgggaactgcgccctggctcgagtgaagatgtcgtagcccat
caagcctgggctcataacgtgctggaggccttcaaccacttccaactgctgtgcgccgtg
cgccagggacccgctggcaccgaacgactcaatcgcgagattgcctccagcctacatgcc
gcgggctggaccgagtcggatcgtggctggtacgaaggtcgtcccgtgatgatgattcgt
aacgattacagccttgggctgatgaacggtgacgtcggcatcaccttgcgcatgcctggt
tcggacggagtcgttcgcctgtatgtggcgttcccggtaacacgtgcaccccaggcaaca
tccgggcaagaagaaagcgcacatgtgcgctgcgtcttgccatcgcggctcggcgacgtg
gaaacggtatacgcgatgaccgtacacaaatcgcagggttcggagttcgagcatacggcg
ctggttttgccagaggaagaatcccttatcctcacgcgcgaacttctatacaccggcatc
acgcgtgcgcgccggtggctgaccctggtaggaacccccggcagcatcgagcaggcgctc
gcacaacgaacgcgtcgctattcgggattgaccgagcgacttttgcatcaaccatag
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