Dyella caseinilytica: ISN74_14175
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Entry
ISN74_14175 CDS
T07062
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dcs
Dyella caseinilytica
Pathway
dcs03030
DNA replication
dcs03430
Mismatch repair
dcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ISN74_14175 (dnaE)
03430 Mismatch repair
ISN74_14175 (dnaE)
03440 Homologous recombination
ISN74_14175 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcs03032
]
ISN74_14175 (dnaE)
03400 DNA repair and recombination proteins [BR:
dcs03400
]
ISN74_14175 (dnaE)
Enzymes [BR:
dcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ISN74_14175 (dnaE)
DNA replication proteins [BR:
dcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ISN74_14175 (dnaE)
DNA repair and recombination proteins [BR:
dcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ISN74_14175 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QRN52607
LinkDB
All DBs
Position
3254179..3257739
Genome browser
AA seq
1186 aa
AA seq
DB search
MSLRFAHLHLHSEYSLVDSTIRIKALVAACVQAGTGAVALTDECNMFALVKFYKACSAAG
IKPIGGCDLWISSLDDPRPWRLTVLCQNRDGYLNLSRLVSRTWREGQQGGRALTDAGWLT
PDATDGLIALLGRESEIGRIAVNQGTEAAASRLRALMQLFPDRLYLELTRCGREGEESWN
NAALMLATELDLPVIASNDVRFLKQDDFEAHEARVCIHQGRVLADPKRPRDYSDQQYLKT
PEDMATLFADIPEALENTVELAKRCNLELTFGTYYLPNFPVPEGHDLASYIRELAREGLK
ERLASAPLAQGHTLADYEARLERELDVIIEMGFPGYFLIVADFINWGKQNGIPVGPGRGS
GAGSLVAWVLKITDLDPLQFNLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGR
DHVSQIITYGSMAAKAVLRDSGRVLGMGYNAVDRIAKLIPPRPLDLTLSCALGRSEKAQK
EPERVVKEFCDLYAQDEEAKTLIDLALKLESLTRNAGKHAGGVVIGPKPLTEFAPLYCEP
GGGGVVTQYDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINERRAKSGEEPLDIAALPLD
DPEPYELLKRAQTVAVFQLESSGMQRMLKDAKPDRFEDIIALVALYRPGPMDLIPSFVAR
KHGREDVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIVGGYSLGGADLLRRAMGKKKIEE
MAKERAKFREGAAKDGLTGDKADSIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKAHYP
AEFMAATISSDMDNTDKAVTFLDESRAIGLTVLPPDVNASEFMFVAVESKVIRYGLGAIK
GVGQGACEAIAEERRKGGAYKDLADFCRRVDSTKLNRRVLEALILSGALDALAPNRASLM
LQLPDAMKAAEQHLRDRQSGQNDMFGAFTSGKSGDAAAPVVQMNLPTVPEWPLEQKLQGE
RETLGHYFSGHPTDPWREELAQLSTCPLGEIADRYQPPRPRKNDGDDNRFRRGPDTPWTV
AGMVVAVRKRGDSDAFVRLEDGTGIIEVSFFGELYQQVAPLLTRDELLVVEGGLRIDEFS
GGGFQVRARSAYTLADACRRFARLLRVKVNGIGPDFIAQFRQALAGHRGGRASVILSGYH
NAKAQADFELGEDWQVNAIPELLRAVRNMPGVIGAGVRLVKTGNGD
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtccctccgtttcgctcatctgcatctgcacagcgagtattcgctggtcgactcgacc
atccgcatcaaggcgctggtggctgcctgcgtgcaagcgggcacgggcgctgttgcgctc
accgacgaatgcaacatgttcgccctggtgaagttctacaaagcatgtagcgccgcaggt
atcaaacccatcggtggctgcgatctgtggatcagttcgctggatgacccgcgcccatgg
cgtctgaccgtgctctgccagaaccgggacggttatctgaacctgtcgcgcctggtttcg
cgcacctggcgcgaaggccaacagggcggccgcgccctgaccgatgccggttggctcaca
cctgatgcgacagacggactgatcgccttgctcggacgcgaaagcgaaattggccgcatc
gctgtgaaccaaggcacggaagccgcggcgtcgcgtttgcgcgcgctgatgcaactcttt
cccgatcgcctgtacctggaacttacccgctgcggccgcgaaggcgaggaatcgtggaac
aacgccgcgctgatgctcgcgaccgaactcgatctgccggtcatcgccagcaacgacgta
cgctttctcaagcaggacgatttcgaagcgcacgaagcgcgcgtatgcatccaccagggc
cgtgtgctggccgatcccaagcgcccacgcgactacagcgaccagcaatacctgaaaacg
ccggaagacatggcgacgctgttcgccgacattcccgaagcgttggaaaacaccgtcgag
cttgccaagcgctgcaacctggaactcacgttcggcacttactacctgccgaacttcccg
gtgccggaaggccacgatctggccagctacatccgcgaactcgcgcgcgaaggcttgaaa
gaacgccttgccagcgccccgctcgcccagggtcataccctggccgattacgaagcgcgc
ctggaacgtgagctggacgtcatcatcgagatggggttccccggctacttcctgatcgtg
gcggacttcatcaactggggtaagcagaacggtattccggtcggcccaggccgcggttcg
ggtgccggttcgttggtggcgtgggtattgaagatcaccgatctcgacccgctgcagttc
aacctgctgttcgagcgcttcctgaaccccgaacgcgtgtcgatgcccgacttcgacatc
gacttctgcatggaccgccgcgatgaggtgatcgactacgtcgcgcgcaaatacggccgc
gaccacgtcagccagatcatcacctacggctcgatggccgcgaaggcagtgctgcgcgac
tccggccgcgtgctgggcatgggttacaacgcagtcgaccgcatcgccaagctgatcccg
ccgcgtccgcttgatctgaccctgtcctgtgcgcttggccgctcggagaaagcgcagaaa
gaacccgagcgcgtggtgaaggagttctgcgatctctacgcacaggacgaagaagccaaa
acgctgatcgatctcgcgctgaaactggaaagccttacccgcaacgccggcaagcacgcc
ggtggcgtggtgatcggccccaagccgctgaccgaattcgcgccgctgtactgcgaaccg
ggtggcggcggtgttgttacccaatacgacaaggacgacgtcgaagccgtcggcttggtg
aagttcgacttcctcggcctgcgaacgctcaccatcatcgactgggccgtgaaggcgatc
aacgagcgtcgcgccaaatccggcgaagagccgttggatattgctgccttgccgctggac
gaccccgaaccatacgagttgctgaaaagagcacagacggtggcggtgttccagctcgaa
tcctccggcatgcagcgcatgttgaaggatgcgaagcctgaccgcttcgaggacatcatc
gccctggtggcactgtaccgccccggcccgatggacctgatccccagcttcgtcgcgcgc
aagcacggccgcgaggacgtggaataccccgacccccgcgtcgagcctgtcctgaaagag
acctacggcatcatggtctaccaggagcaggtgatgcagatggcgcagatcgtgggcggt
tactcgctcggcggcgccgacctgctgcgccgcgcgatgggtaagaagaaaatcgaggag
atggccaaggagcgcgccaagttccgcgagggcgccgccaaagacgggctcaccggcgac
aaggctgactccatcttcgacttgatggaaaagttcgccggctacggcttcaacaagtcg
cacgccgccgcctacgcgctggtctcgtaccagaccgcgtggctgaaagcgcactacccc
gccgaattcatggccgcgacgatctcgtcggacatggacaacaccgacaaggcggtcacc
ttcctcgacgaatcgcgcgcgatcggcctgactgtcctgccgccggacgtgaacgcctcg
gagttcatgttcgtcgcggttgagtccaaggtcatccgctatggccttggcgcgatcaag
ggcgttggccaaggtgcctgcgaagccattgccgaggaacggcgtaaaggcggtgcgtat
aaggacctggcggacttctgccgccgcgtcgattcgaccaagctcaaccggcgcgtgctc
gaagcgttgatcctctccggcgcgctcgatgcgctggcgcccaatcgcgccagcctgatg
ctgcaattgccggatgcgatgaaggcagccgagcagcacctgcgcgatcgccaatcgggc
cagaacgacatgttcggcgcgttcacatccggcaagagcggggacgcggccgctcccgtg
gtacagatgaacctgcccacggtgcccgaatggccactggagcagaagctgcaaggtgag
cgcgaaacgctcggccattacttctccggccaccccaccgatccgtggcgcgaggaattg
gcccagctatcgacctgcccgctgggtgagatcgccgaccgctatcagccaccgcgccca
cgcaagaacgatggcgatgacaaccgcttccgccgcggccccgacacgccctggaccgtc
gccggcatggtcgtggcggtgcgcaaacgcggtgacagcgacgccttcgtgcgcctggaa
gacggcactggcatcatcgaagtgagctttttcggcgagctttaccagcaggtcgcaccg
ctgcttacgcgcgacgagctgctggtggttgaaggcggcctgcgcatcgacgaattctcc
ggcggcgggttccaagtgcgtgcccgcagtgcctacaccttggccgacgcctgccgccgc
ttcgcgcgcctgctgcgggtgaaggtcaacggcatcggccccgacttcattgcgcagttc
cgccaggcgctggccggtcaccggggcggtcgcgccagcgtgatcttgagcggctaccac
aacgccaaggcacaggccgatttcgagctgggtgaggattggcaggtcaatgcgattccc
gagctgctgcgggcggtacgcaacatgcccggcgtaatcggagcgggcgtcaggctcgtg
aaaaccgggaacggggattag
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