Dyella caseinilytica: ISN74_19245
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Entry
ISN74_19245 CDS
T07062
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dcs
Dyella caseinilytica
Brite
KEGG Orthology (KO) [BR:
dcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcs03032
]
ISN74_19245
03400 DNA repair and recombination proteins [BR:
dcs03400
]
ISN74_19245
Enzymes [BR:
dcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ISN74_19245
DNA replication proteins [BR:
dcs03032
]
Prokaryotic type
DNA Topoisomerases
ISN74_19245
DNA repair and recombination proteins [BR:
dcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ISN74_19245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Motif
Other DBs
NCBI-ProteinID:
QRN53518
LinkDB
All DBs
Position
complement(4360457..4362943)
Genome browser
AA seq
828 aa
AA seq
DB search
MAKNLLIVESPAKAKTINKYLGKDFQVLASYGHVRDLKPKEGAVDTEHDFAMKYEVIERN
EKHVDAIAKAAKVADDIYLATDLDREGEAISWHISEILKERGISKGKQMHRVVFSEITPK
AIKAAVAAPRALSHDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFVAREYWTVEAQLKHADGDFSARLTKLNGKKFEQFDLTNETDATAARAALKE
AARGQLTVSEVGSKERKRRPAPPFTTSTLQQEAARKLGFTTSRTMKIAQGLYEGVGLGTE
GNVGLITYMRTDSTALSDDAVGELRQLIARDYGNKALPDGPQVYRTKSKNAQEAHEAIRP
TSAMRTPREVTQFLNDEQRKLYELIWKRTVACQMIHATMNTVSVDFDVKHVKGGDAAFRA
TGTTVVDPGFLAVYEEGRDQKTAEDDDEGRRLPRMEKGEQVPLQDIVTDQHFTEPPPRFS
EASLVKALEEYGIGRPSTYASIIQVLQNREYVLLDNRRFRPTDVGRAVSKFLTQHFTQYV
DYDFTAKLEDELDAVSRGEEAWVPLMQRFWQPFKQQVEEKTESVDRSEATGARELGSDPK
SGKPVSVRLGRYGPYAQIGDKDVDEKLQFASLRPGQSMHTITLEEAIELFKLPRKLGQAE
NGDEVSVGVGRFGPFVKQGSTYASLKAEDDPYTIELPRALQIVQEKLELIANRIIKDFGN
GVQILNGRFGPYITDGEKNARIPKDQEPKDLTEAQCVELLAAAPVKKGRFAKKTATKKAE
SATKKAAAKKTATTKTATKKTAAKKTAAKKTATKKTAAKKAATKKAKV
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaacctgctcatcgtcgagtcaccggctaaggccaagacgatcaacaaatac
ctcggcaaggactttcaggtcctggcttcctacgggcacgtgcgcgacctgaagccgaaa
gagggggcggtcgacaccgagcatgacttcgccatgaagtacgaggtgatcgaacgcaac
gagaaacacgttgacgccatcgccaaggcggccaaggtggccgacgacatctacctcgcg
accgacttggatcgcgaaggcgaggcgatcagctggcacatcagcgaaatcctgaaagag
cgcggcatcagtaagggcaagcagatgcatcgcgtggtgttctcggaaatcacgcccaag
gcgatcaaggctgccgtcgccgcgccacgtgcgctgtcgcacgatctggtcgatgcgcag
caggcacgccgcgcgctggattacctggtgggcttcaacctctcgccggtgctgtggcgc
aaagtgcagcgcggcctgtccgccggccgcgtgcagagtcccgcgctgcgcatgatcgtg
gagcgcgaggaagagatcgaagccttcgttgcccgcgaatactggacggtggaggcgcag
ctcaagcacgccgacggcgatttcagcgcgcgcctgaccaagctcaacggcaagaaattc
gagcagttcgacctcaccaacgaaacggatgcgacggcggcacgcgctgcgctgaaggaa
gctgctcgcgggcagctcaccgtcagcgaagtcggcagcaaggagcgcaagcgtcgtcct
gcgccgccgttcaccacctccaccttgcagcaggaggctgcgcgcaagctgggctttacc
accagccgtaccatgaaaatcgcgcagggtctgtatgaaggcgtgggtttgggcaccgaa
ggcaatgtcggcctgattacctacatgcgtaccgactccaccgcgttgtcggacgatgcc
gtgggcgagctgcgccaactgattgcacgcgactacggcaacaaagcgctgccggatggt
ccgcaggtctatcgcaccaaatccaagaacgcacaggaagcgcacgaagcgattcgtcct
acctcggccatgcgcacgccgcgtgaagtgacgcagttcctcaacgacgaacagcgcaag
ctctacgagttgatctggaagcgcaccgttgcctgccagatgatccacgcgaccatgaac
acggtgtcggtggatttcgacgtcaagcatgtaaagggcggtgacgcggcgtttcgcgcc
accggcaccaccgtcgtcgatcctggctttcttgccgtctacgaagaaggccgtgatcag
aagactgccgaggacgatgacgaaggccgccgcctgccgcgcatggaaaagggcgagcag
gtgccactgcaggacatcgtcaccgatcagcatttcaccgaaccgccgccgcgcttctcc
gaagccagcctggtgaaggcgctggaggaatacggcatcggccgtccgtccacttacgcc
agcatcatccaggtgttgcagaaccgcgaatacgtgctgctggacaaccgccgcttccgt
cccaccgatgtgggccgcgcagtcagcaagttcctgacccagcatttcacccagtacgtc
gattacgacttcaccgccaagctcgaagacgagctcgatgcggtgagccgcggcgaagaa
gcctgggtgccgctgatgcagcgcttctggcaaccattcaagcagcaggttgaagaaaag
acggagtcggtcgaccgcagcgaggctacgggcgcacgcgagctgggtagcgatccgaaa
tccggcaagccggtgtcggtgcgtctgggccgttatggaccgtacgcgcagatcggcgac
aaagacgtggacgagaagctgcagttcgcttcgctgcgtccgggccagagcatgcacacg
atcacgctggaagaggcgatcgaactgttcaagctgccgcgcaagctcggccaagccgag
aatggcgatgaagtctcggtcggtgtcggtcgtttcggccccttcgtgaagcagggcagc
acctatgcctcgttgaaggcggaagatgatccgtacaccatcgagttgccgcgtgcgctg
cagatcgtgcaggaaaagcttgagctgatcgccaaccgcatcatcaaggacttcggcaac
ggcgtgcagatcctcaatggccgctttggtccgtacatcaccgatggtgaaaagaatgcg
cgcattcccaaggatcaggagcccaaagacctgaccgaagcgcagtgcgtggaattgctg
gcggcggcgccggtcaagaagggtcgttttgccaagaagaccgcgactaagaaggctgag
tcggcgacgaagaaagcggcagccaaaaagacggcgacgacgaagaccgcaaccaaaaaa
acggcggccaagaaaaccgcggccaagaaaacagcaacgaaaaagaccgctgcgaaaaaa
gccgcaacgaaaaaagcaaaggtctga
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