Dendrobium catenatum: 110092002
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Entry
110092002 CDS
T05027
Name
(RefSeq) exosome complex exonuclease RRP46 homolog isoform X1
KO
K12590
exosome complex component RRP46
Organism
dct
Dendrobium catenatum
Pathway
dct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110092002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110092002
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110092002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110092002
NCBI-ProteinID:
XP_020671994
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MFEMVELITSSTLHIRNNVRADGRTLNQLRPLTCSRNLLNRAHGSARWSQGDTTVLAAVF
GPKAGTKKGENPEKASIEVIWKPKTGQIGRREKEYEMILRQTLQSICLLTVHPNTTTSII
VQVIGDDGALLSCAINASCVALVDAGIPLKHLAVSICCGLTVGGHVILDPTVLEEQKLKA
VLHLVFPNPPLSIHHKTQSLLKDEPIEHGIITSVMRGVMSVPDYEHCLDRGRIACTKISE
FVRRNLQSSAREGLAKAT
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaatggtggagttgattacatcctctaccctccacattcgtaataatgttcga
gctgatggtcgaacactgaaccaactaaggcctctcacttgttctcgaaatctactcaat
agagctcatggttcagctcgatggtctcaaggagacacgactgtattggccgctgtattt
ggaccaaaagctggaacaaaaaagggcgagaacccagaaaaagcttctattgaagtaatt
tggaagccaaaaactggacagataggaaggcgagaaaaggaatatgagatgatcttacgt
caaactttgcaaagcatatgtttgcttactgtccaccccaacacaactacctccatcatc
gttcaggttattggggatgatggtgctcttctctcttgtgctataaatgcatcgtgtgta
gctcttgttgatgcaggcattcctctaaaacatctcgcagtttccatttgttgtggtttg
actgtgggtggacatgtaattttagatcccactgtactagaagagcagaaattgaaggct
gttcttcatctggtttttccaaaccctccgctttcgatccatcataaaactcaatctctt
ttaaaagatgagcctattgagcatggaattataacatctgttatgcggggtgtgatgtca
gtgcctgactatgagcactgcttggatcgtggccgtattgcttgcacaaagatctctgaa
tttgttaggagaaacttgcagtcctcagctcgggagggcctggcaaaagctacttag
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