Dendrobium catenatum: 110092030
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Entry
110092030 CDS
T05027
Name
(RefSeq) uncharacterized protein LOC110092030
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110092030
Membrane trafficking [BR:
dct04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110092030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps62
VPS13_VAB
VPS13_C
VPS13_M
Motif
Other DBs
NCBI-GeneID:
110092030
NCBI-ProteinID:
XP_020672034
LinkDB
All DBs
Position
Unknown
AA seq
2354 aa
AA seq
DB search
MGKKGDQVYAFWRPRAPSGFAVLGDCLTPLNEPPSKGVLAVNTSLVKVKRPVSFSLIWSF
SPENTASSSYDLLINVPNKNDSSSNESCSIWFPVAPKGYVAVGCVVSYGRGQPSLSSALC
ILSSLVSPCAVKDCIAFQMADMAFWRVDNSFGSFLPANPDMSINGRAYDLHCMIFWQSEK
PSRTLKSSTAQNNQQTSSHGPLLEGPMLTSRRLFEVVARFKLIWWNQGTNPRKKLSIWRP
VVSHGMIFLGDLAVQGYEPPNSAIVLYDTDDEGFLRRPQDFQPVGHIRKYKGSDGINFWL
PLAPPGFVSLGCIASKGPPKSDDFNSLRCIRSDMLIGDQFSEDNIWDTSDTLASTESFSL
WGVGYEVGTFIVRKGFKKPPKRFALKLAIPNVSSGSDDTVIDAEIKTFSVAIFDDYGGLM
VPLFNVSLSGIGFNLHGRPDYMNSTVSFSLAARSYNDKYDAWEPLIEPMDAFLRYQYDLN
TPGSATQVRITSTKDLNLNISVSNANMIFQAYASWNNLSLVDEPYVKNIYQEVNPSKYAE
GSVIDIDHRRNYFIIPQNKLGQDIFIRVAETTRLANIIKMPSGGNIRVKVPVSKNMLDSH
LKGCINRVSQSMLTIIISEAEFPTRKGMASSQYTVAARLFLIPPTGSFRKQQSARTCGAI
PEPLDATKSSVKWSEILFFKVDIVDNYAMEFVVIDMGRGEPVGIYSAPLKQIAYEVHPSS
SSQSSCYDVTWRDLSAKRTDFHNDAHGEVHGRIKCAVLLSIQDDVNKENNDQNSGRRVGL
IQISPTREGPWTTVRLNYASPAACWRLGNDVVASELSVKDGNRYVSIRTLVSVINNTNFN
IDLRLKSKCSIESLDFLGDENENGNKGPDYNRIHMDEIFETEKYSPSGGWVSCSQQSPSS
NSYAVRSIKDVHQESPSASLPDGWEWVDEWQVDATSTETPDGWVYAPDTEHLKWPESLDN
VNVINYARQRRWIRRRKYTSYDTDSVIPVGLLEPGHLIPLPLSCFVHPVVSYVLQLRPEI
SYESKEYSWSSVVDKYVPKENLDNSEASEICISALIEADELLYCSEMSELSSDKDQGLWF
CLSIQATQIGKDIQSNPIHDWKLTISSPLSITNFLPFTAEFAVISKEGGESTTCSQGTLI
PGKPVKIYNADMQKPLFLSVHPQGGWDLIHEPIPLSSPRKISTKMMSLRNSYSGRVDMVI
IEQNIDKDSLIARTIRIYVPFWIASARCPPLTCYFMDKSAKTNKRNFSILPHSNMKTQKV
LWQITDEEMTNGYTIASALNFKDLGISVSLEKPGIEQFSPVRDLSPLGDMGGSIDLYAYS
NDGKCMRLFISSKPSPYESIPTKVILVCPFMTFTNRLGRDVLIKFNIDDQPKVLNASDTR
VSFVYCNAGTEKIQVRLQNTSWCLPLEIEKEDTVTIALREHHGGRTYLRVEIRGYEEGSR
FLVVLRMEPENGPIRIENRMADRTVRFRQSGLGDDFCIQLEPLSTSNFSWDDPYGQICID
VSIQGGAYVHNILLEEGKDSTDLKAHGVQLCVEETGDIRVVRFVDDKRIVLSESKKRTEP
LDKINNSSLNEMQVSPSPLELIIELGVVGISLIDHHPRELLYLYLEKVFISYSTGYDSGK
TNRFKLILGQLQLDNQLPLTVMPVLLAPEDMPDTSHPVFKTTITLSNDSLDGAQVYPYIY
VRVIDKCWRINIHEPIIWALVDFYNNLRLDSIPSTSEVAQVDPEIRIDLIDVSEIRLKLS
LETSPNQRPHGALGMWGPILSAVGNAFKLQLHLRKVMHRSRFMRKSSILPSIVNRVKRDL
IHNPLHIIFSVDVLSMTKSTLASLSKGFAELSTDRQFLQLRSKQVWSRRITGFGDGFLQG
TEAFAQGVAFGVTGVLTKPVENARQHGFLGLAHGIGRAFLGVVVQPLSGALDFVSLTVDG
IGASFVKCLDIINNKATAQRRRNPRAIQANGVIKEYCEREAVGQMILYLAEASRHLSCTD
LFKEPSKYAWSDFYEDHFIVPYQRIVLVTSKRVMLLQSLSLEKLDRKPSKIVWDVPWEEL
LALELAKAGHNKPSHLIIHLKHFRKSESFVRVVRCNVDEEEGQEPQAVMICSCIRRMWKA
ARQSDLEVLTLKVPSSQRHVQFAWDESNGRDSYKSIKPMIKPRGLSSAGSLSDEMRFKKH
CVNFRKIWSSEQEYKSRCTLFPKQVVDDGTICSIWRPFCPNGYVSVGDVAHIGNHQPHVA
AIYRESAGNFSLPVGYDLVWRNCSNDYNSPLSIWLPRPPDGFIAVGCVAVSDFEEPPLDS
AYCVSAELAIETEFEEQMVWSAPDSYPWACYIYQVHSEALQFIALRQLKEESDWKPMRVS
QHDLPQLSEASADQ
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaagggcgaccaagtatatgccttttggagaccccgtgcaccatctggattt
gctgtacttggagattgtttgacgccactgaacgagccaccttctaaaggggttcttgct
gtaaacacaagcttggtaaaagtaaagaggcctgtgtcattcagcttgatttggtctttc
agtccggagaacactgctagcagcagctatgatttattgataaacgttccaaacaagaat
gatagctcgtcaaatgaaagctgttccatttggttcccagttgcacctaaaggctatgtg
gcagttggttgtgtggtttcctatggaaggggacaaccatcattatcttctgctttgtgt
atcttgtcttccttagtgtctccatgtgcagtgaaagactgcattgcatttcaaatggct
gatatggcattttggcgagtggataactcatttgggtcctttttgcctgcaaaccctgac
atgagcattaatggaagggcgtatgatctccattgtatgatcttttggcaatcagagaag
cctagcaggactttaaaaagttcaaccgcccaaaataatcagcaaacctctagtcatggt
ccattacttgaaggacccatgttgacctcaaggcggcttttcgaagttgtggcacgtttc
aagttaatatggtggaatcaaggaacaaaccctcggaagaaattgtctatatggcgtcct
gtggtttcacatgggatgatttttcttggtgatcttgccgttcaaggttatgagcctccc
aactcagctatcgtcctttatgacactgatgatgaaggttttcttagacgccctcaggac
tttcaacctgttggacatattagaaagtataaaggaagtgatggtataaatttctggctg
cctcttgctcctccgggatttgtttccttgggttgtatcgcatctaaaggtccacccaag
agtgatgacttcaactctttaaggtgcatacgtagtgatatgctcataggcgatcagttt
tctgaagataatatatgggatacttctgatacattggcttcaactgaatcgtttagctta
tggggtgttggttatgaggtgggcacatttattgtccgaaaaggatttaaaaagcctcca
aaaaggtttgctttgaagctggctattccaaatgtatccagtgggtcagatgatacggtg
attgatgcagaaattaagactttttctgtggctatttttgatgattacggagggctgatg
gttcctctttttaatgtttctctaagtggcattgggtttaatttgcatggaaggcctgac
tatatgaattctactgtgagtttttcattggctgcaaggtcttacaatgataagtatgat
gcttgggagcctcttattgaaccaatggatgcatttctaaggtatcaatatgatctaaat
acaccaggctctgctacccaggttcggataacctctaccaaggatctcaacttgaatatc
tctgtatctaatgcgaacatgatttttcaagcttatgctagctggaataacctaagcctc
gttgatgaaccttatgtaaaaaatatttatcaggaagtcaacccgtcaaaatatgctgag
ggatctgtaattgatattgatcatagaagaaattatttcattattccccaaaacaagctt
gggcaagatatatttatccgagttgctgaaacaacgagattggcaaacataattaagatg
ccatcaggaggcaacatacgtgtaaaagttcctgtatcaaaaaatatgttggactctcac
ttgaaaggttgtatcaatagagtctctcagtcaatgttgacgattatcatttcagaagct
gaatttcctacaaggaaaggaatggcatcttcccaatatactgtagcagcacgtcttttt
ttaatccctcctactgggtcttttaggaaacaacagagtgctcgaacttgtggtgccatc
cctgaacctttagatgctacgaagtccagtgtaaaatggagtgaaatacttttcttcaaa
gtagacattgtggataattatgcaatggaattcgttgtcattgacatgggaagaggtgag
cccgtagggatatattctgctcctttaaagcagatagcttatgaggttcatcctagttcc
agttcgcagagctcttgctatgatgtaacatggagagatttgtcagctaaaagaacggat
tttcacaatgatgctcatggagaagtgcatggaagaataaaatgtgctgtactactttct
attcaagatgacgttaataaagagaacaatgatcaaaattctgggagaagagttggatta
atacagattagtcctacaagggaaggaccatggacaactgtgaggttaaactatgcttcc
cctgcagcatgttggagattgggcaatgacgttgttgccagtgaattatctgtgaaagat
ggcaacagatatgtgagcatacggactttggtttctgttattaacaacactaattttaat
attgatctacgtcttaaatcaaaatgttctattgagagcttggattttttgggtgatgaa
aatgagaatggaaacaaaggacctgattataacagaattcacatggatgaaatatttgaa
accgaaaaatacagtccgtctggtggttgggtcagctgttctcagcagtcgccatcctca
aattcttatgctgtaaggtcaattaaagatgtgcatcaggaatcgccaagtgctagtttg
ccagatggttgggaatgggttgatgaatggcaggttgatgcaacttcaacagaaactcct
gatggctgggtttatgcacctgatactgagcatctgaaatggcctgaatcattagataac
gtaaatgtcattaattatgcaagacaaagaagatggattaggcgtagaaaatacacatcg
tatgacacagacagtgtgattcccgttggactactcgaaccaggtcatcttattcctctg
cctctctcttgctttgtgcatcctgtggtttcttatgtcttacagttgaggccagaaatt
tcctatgaatcaaaagagtattcttggagttctgtagtagacaaatatgtgccgaaagag
aacttagataattctgaagcctcagaaatatgtatttctgcacttattgaagctgatgag
cttttatattgctcagaaatgagtgagctttcttcagataaggaccagggtttgtggttt
tgtttaagcatacaagccacacaaattggaaaagatattcagtcaaatcccatacatgat
tggaaactcactataagttcacctttatctataacaaatttcctcccctttactgctgaa
tttgctgttattagtaaagagggtggagaaagcactacctgctctcagggtactctcatt
cctggtaaacctgtaaagatctataatgctgatatgcaaaaaccattattcttatcagtt
cacccacaaggaggttgggatctaatacatgagcccattcccttatcaagcccaagaaaa
atatcaaccaagatgatgagtctaagaaattcttattcgggaagggttgacatggttatc
attgaacaaaatatagacaaggacagtttaattgcaagaacaattcgaatatatgtacct
ttttggattgcaagtgcaagatgtccgccacttacttgttactttatggacaaatctgca
aaaacgaataagagaaacttttctatcttaccacattctaatatgaaaactcaaaaagtt
ctttggcaaatcactgatgaggagatgactaatggatacaccatagcttctgcacttaac
ttcaaagatttgggtatatctgtatctttagaaaaacctggcatagagcagttcagtcct
gttagagatctatctccccttggtgacatgggtggttctattgatctttatgcttatagc
aatgacggaaagtgtatgaggctatttatttcctcaaagccatccccatatgagtctatt
cctacaaaggttattttggtgtgtccgtttatgacattcacaaacaggcttggtagagac
gtgctcattaagttcaatattgacgatcaaccaaaggttctgaatgcttccgacacaagg
gtttcttttgtttattgtaatgcaggaactgaaaaaattcaggttcgcctgcaaaataca
agctggtgcttacctttggaaattgagaaagaagacaccgtcactattgcgttgagggag
catcatggtggtaggacatatttgagggttgagattcgtggttatgaagagggatcacgg
tttttagtggtgttgcgtatggaaccagaaaatggtcctatcaggattgagaacaggatg
gctgatagaacagtgagatttcgccaatcaggtttaggtgatgacttttgtattcagttg
gaaccattatcaacttcaaacttctcctgggatgatccttatgggcagatatgtatagat
gttagtattcaaggtggagcttatgtccataatatcctcttggaggaaggcaaggattca
acagatctaaaggcacatggagttcaactttgtgtcgaagaaactggagatatcagagtt
gtaagatttgtggatgacaaaagaatagttctatcagaatcaaagaaaaggactgaaccg
cttgataaaattaacaactcatcattgaatgagatgcaagtcagcccctcccccctggag
cttataattgagctgggggttgttggcatatccttgattgatcatcatcctagagagctc
ttgtacctttacttggagaaagtctttatttcatattcaacagggtatgattctgggaaa
acaaacaggttcaagctcattcttggtcagctgcagcttgacaaccagctgccgttgaca
gtgatgcctgttctcttggcacctgaagacatgccagatacaagtcatccagtttttaaa
accaccatcactttaagcaatgacagtttagatggtgctcaggtctatccatatatttat
gttcgggtaattgacaagtgctggagaataaacatccatgaaccaattatatgggcattg
gttgatttctacaataatcttcgtttagatagtatccccagcacctcagaagttgctcaa
gttgatccagagatacgtattgacttgatagatgtttcagagataaggttgaaactatct
ctagagacttctccaaatcaaagacctcatggagcccttggtatgtggggcccaatattg
tcagctgttgggaatgcatttaaacttcagcttcatttaaggaaagtcatgcatcgaagt
cggttcatgaggaaaagctccattcttccttctattgtgaatcgtgtcaagagagacctt
attcacaaccctttacatataatattctctgtggacgtattgagcatgacaaaatcaact
ttggcctctctcagtaaaggatttgcagagctttcaacagatcgacagtttttgcagttg
cgctcaaaacaggtttggtcaaggaggataactggttttggtgatggatttcttcaagga
actgaagcttttgcacagggtgtagcttttggtgtgacaggggtgttgacaaagcctgtt
gagaatgctagacaacatgggtttttaggacttgctcatggaattggacgtgcttttctt
ggagttgttgtccagccgctaagtggggcgttagattttgtttcgttgacagtagatggc
attggtgccagttttgtcaaatgcttagatatcataaataacaaagcaactgcacagaga
agaagaaatcctcgtgccattcaggcaaatggtgttattaaagagtactgtgaaagagag
gcagttgggcagatgattctttatttagcggaagccagtagacacctgagttgtactgat
ctattcaaagagccttcaaaatatgcttggtctgatttttatgaagatcatttcattgtg
ccataccaaaggattgttctggtaacaagcaagcgtgtcatgctacttcagtctttatca
cttgaaaaattggatagaaaaccctcaaagattgtttgggatgtgccttgggaagagctt
ctggcactagaattagccaaagcaggtcataataagccatcacatttgatcatccatctc
aagcactttaggaagtcagaaagctttgtacgagttgtcaggtgcaatgtagatgaagag
gaaggacaagaacctcaagctgttatgatttgtagttgcatacggagaatgtggaaagct
gctcgccaatctgatttggaagtcctgactttgaaggttccttcaagccagcgccatgtc
caatttgcctgggatgaatcaaacgggagggattcctataaaagcattaaacctatgatc
aaaccaagaggactctcttcggctggttcactttctgatgagatgagattcaagaagcat
tgtgtgaattttcggaagatatggagcagtgaacaagaatataaaagtagatgtacatta
tttccaaagcaggttgttgatgatggtaccatatgcagcatttggagacctttttgtcca
aatggatatgtttctgttggggatgtggctcatataggaaatcatcaacctcatgtagcg
gcaatctacagggaatctgctggaaacttctcgctccctgtgggttatgacctagtatgg
aggaactgttccaatgactacaattcacctttgtccatttggcttccaagacctccagat
gggttcattgcagttggctgtgtagcagtttctgattttgaggagcccccacttgattct
gcatattgcgtaagtgcggaattggcaatagagacagaatttgaagaacaaatggtgtgg
agtgctccagattcttatccgtgggcttgctacatttatcaagtgcacagcgaagcgctt
cagttcattgcgctccgtcagctaaaagaagaatccgactggaaacccatgagagtttct
caacatgatctcccacagttgtcagaagcttcagcagatcaatag
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