Dendrobium catenatum: 110092057
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Entry
110092057 CDS
T05027
Name
(RefSeq) cleavage stimulation factor subunit 77
KO
K14408
cleavage stimulation factor subunit 3
Organism
dct
Dendrobium catenatum
Pathway
dct03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110092057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110092057
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110092057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
TPR_Edg1
TPR_16
Motif
Other DBs
NCBI-GeneID:
110092057
NCBI-ProteinID:
XP_028557305
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MSEDSKLKGGDVADTDIYNVEAAEILANEALLLPLYEAVPIYEQLLSTFPTSAKFWKQYV
EAYMAINNDEATKQIFSRCLLNCLQISLWRCYIRFIRKVNDKKGSEGLEETRKAFDFMLS
YVGSDISAGPVWMEYITFLKSMPVVTAQEESQRMISMRKIYQKAIVTPTHHIEQLWKDYE
NFENSINRALAKGLLSEYQPKYNSARAVYRERKKYIDEIDWNMLAVPPKGSFKEEQQCIA
WKRLLAFENSYVYVFNYVIYFMSMLSYALSYTTVPKYQKCTDQKVTDTEATCKGLDRPVQ
QNPDQGGADQVEARGKILAPLVGLLRLFKENQPSQPKGRLNAHIGGKANTEVDSGFLLDA
YGDILITRLPFFDVGFDRDDTIEDYLNRIIPTLVEMIDYQFSDYEWTINGHPGHLHLRLP
SQQRRSSCMMFMYHYPDIWYDYATWLSKNTSLDSAAKVFQRALKALPDSAPLKYAYAELE
ESRGAIQPAKKIYESLIDNNASVTSLAHIQFIKFLRRTEGIEVARKYFLDAQKLSNCTYH
VFVAYAMMAFCLDKDVKLAHNVFEAGLKKFMNEPGYILEYADFLCRLNDDRNVRALFERA
LSLLPPENSEEVWKQFAKFEQTYGDLASILKVEQRRKEALSGAGEEDSSTLESTLHDVVS
RYNFMDLWPCSSKELDHLARQEWLARTIDKKADKSFLLNGTNALAKVSMGQVSKVYSQSA
KISYPDTSRMVIYDPRQTNELPTFSNSIDSGNYKRADDILKSVSPALATFITNLPAVEGP
YPDVDVVLSILLQYSTPAGTTGKTYSNHQAVSFAVPSTSDLSGSSKTRLNPNGSSRRYPR
EGHSGIRKDIDRQEDDEVTTVQSRPLPRDMFRIRQIQKSRGPTASQTGSAASAGSAFSGD
QSLSTD
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattcgaagctgaaaggtggggatgtagcagacactgatatttacaatgtc
gaggcggcagagattcttgcaaatgaggccctgcttctcccattatatgaggcggtgcca
atttacgagcagcttctttctacttttcctacttccgcaaaattttggaagcaatatgtg
gaagcatatatggccataaacaatgatgaagctacgaaacaaatcttcagtaggtgcttg
ttgaactgtcttcaaatctccctctggcgttgctatattcgtttcatcagaaaagtcaat
gacaagaagggttctgagggcctggaagaaactaggaaagcttttgattttatgttgagt
tatgttggttctgatatatctgctggacctgtgtggatggagtatattacctttttgaag
tcgatgcctgttgtgacagctcaagaggagtcccaacgcatgatttctatgaggaaaata
taccaaaaagctattgtcactccaacccatcacatcgaacaactctggaaggactatgaa
aattttgagaactctattaaccgtgctttggctaaaggcttattatctgaatatcagccc
aagtacaacagtgctcgggctgtctatagggaacggaaaaaatacattgatgaaatcgat
tggaatatgcttgcagttccgcccaagggttcctttaaggaagaacaacagtgtattgca
tggaagaggcttttggcatttgaaaattcatatgtatatgttttcaactatgtcatatat
tttatgtctatgctttcttatgcattatcttatacaaccgtaccgaagtaccagaagtgt
actgatcagaaagttactgatacagaagcaacctgcaaggggctggaccggccggtccaa
cagaatccagaccagggaggggcggaccaggtggaagctagggggaaaattttggccccc
cttgtggggctgttacgcctgttcaaggagaaccagcccagccaaccaaagggccggctc
aatgcacatataggaggcaaagcaaataccgaggttgatagcggattcttactcgacgcc
tatggagacatcctcatcactcgattgccattcttcgacgtcgggtttgatcgtgacgac
accattgaagattacttgaaccgcattatccccacactcgtggaaatgatcgactatcaa
ttctcggactacgagtggaccatcaacggtcacccgggtcacctccacctccggctacct
tcccaacaacgacgttcctcgtgcatgatgtttatgtaccattatcctgatatatggtat
gactatgccacatggctttcaaagaatacttctctagattctgcggccaaagttttccaa
cgtgccttgaaggcccttcctgattctgcccctttaaagtatgcttatgcggaactggaa
gagtctcgtggagcaattcagcccgccaagaaaatttatgaaagtcttattgataacaat
gctagtgtcacatcacttgcacatattcagttcattaagtttttaaggagaacagaaggc
attgaagttgctcgcaaatatttcctagatgctcagaagctctcaaactgtacttatcat
gtatttgttgcttatgctatgatggcattttgtcttgacaaagatgtaaagcttgcacac
aatgtttttgaggcaggcttaaaaaagttcatgaatgagcctggttacatacttgaatat
gcagatttcttgtgtcgtctaaatgatgatagaaatgtacgtgccttgtttgaacgtgca
ctaagcctgcttccccctgaaaattctgaagaggtctggaaacaatttgctaaattcgaa
cagacatatggagatctggcaagcattttaaaggttgagcaaaggcgaaaagaagctcta
tctggtgcaggtgaagaagattcatcaacattggagagtactttgcatgatgttgtctct
cggtacaacttcatggatctttggccttgctcgtccaaagaattagatcatttagcaagg
caagagtggcttgccagaaccattgataagaaagctgacaagtcttttcttctgaatggg
actaatgctttggctaaagtttccatgggccaagtgagtaaggtttattcacaatcagca
aaaattagttacccggacacttctcggatggtgatatatgatcctagacaaactaatgaa
cttccaactttctccaactctattgattctggaaattacaaaagagctgatgatatattg
aaatcggtgtcaccagcattggcaactttcattacaaaccttcctgctgttgaaggacct
taccctgatgtggatgttgtattatctatcttgttgcaatatagcacacctgctggaact
actggaaaaacatattccaaccaccaagctgtttcttttgctgttcccagcactagcgat
ctgtcaggatccagcaaaacaaggttgaatcctaatggttcatcacgtagatatcctaga
gaaggacattctggaataagaaaagatattgacagacaagaggatgatgaagtcacaact
gtacagagcaggcctctcccccgggatatgtttaggatcagacaaatacagaaaagcaga
ggtccaaccgcttctcagaccggctcagctgcttctgctggaagtgctttttcaggcgat
caatcccttagcacagactaa
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