Dendrobium catenatum: 110092061
Help
Entry
110092061 CDS
T05027
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dct
Dendrobium catenatum
Pathway
dct00040
Pentose and glucuronate interconversions
dct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110092061
Enzymes [BR:
dct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110092061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110092061
NCBI-ProteinID:
XP_028550607
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MAPSSDLLILLLLFVVFSTTLTSSFPYYPPIPSLNPIDSCWRYDPLWSSHRQSLANCPRG
FGATAIGGKYGPIYTVTDPSDNPLNPTPGTLRYAAIQNNPLWIIFSRDMSIKLKNELIIN
SYKTIDGRGVKVDIGNGGPCITIQDVSHVIVHGITIHGCTKGKAGIVRSSPTHAGHRQGS
DGDAVTIWSSTDVWIDHCNLSSCFDGLVDVTHGSTRVTISNNLFADHDKVMLFGHVDGFA
PDKAMKVTVAFNRFSVDLIQRMPRVRTGYAHVANNRYDGWEMYAIGGSSNPTILSEGNYY
VAPNNRDAKEVTKREEGNWKNWKWRSTKDLFLNGAYFVPSGWGSCTPVYSSSQQFYVATG
SMVPLLTANAGVLSCSMAKPCVVGYLLLKQGKQRMIASKRKGQFCRKAIGMKIGSQEYVN
KNPNGRNPTKSNTRQNRISSVWPLLHTSVIHFDTISTRNTISTALVLALSNQESVTHRPP
ATVIGADEFLSRSAFRLLPNFDQFHPKSIRV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggccccttcctccgacctcctcatccttctcctcctcttcgtcgtcttctccaccacc
ctcacatcctccttcccatactacccacctatcccctccttgaaccccattgactcctgc
tggcgctacgaccccctctggtcatcccatcgtcaaagcctcgccaattgcccccgcggc
ttcggcgccaccgccatcggtggcaaatacggccccatttacaccgtcaccgacccctcc
gacaaccctctcaaccccacccccggcactctccgctacgccgcaatccaaaacaaccct
ctatggatcattttctcaagagacatgtccatcaaacttaagaacgagcttatcataaat
agctataagaccatcgatgggcgaggagttaaggtcgatattggcaatggcgggccttgc
attactatacaggatgtgagccacgtgatcgtgcatgggattacgatccatggatgcacg
aaaggtaaagctgggattgtgcgtagctctccaacgcatgcagggcatcgtcagggctct
gatggcgatgctgtaacaatttggtcttcaacggatgtttggattgatcactgtaacttg
tcgtcatgcttcgatgggttggtggatgttacgcatggttctacgagggtgaccatttcg
aataatttgtttgctgatcatgataaagtaatgctgtttggacatgtggatgggtttgca
cctgacaaggcgatgaaggtgacggtggccttcaatcgatttagcgtagatttgatccag
agaatgccacgggtcagaacaggctacgctcacgtcgcgaataacaggtacgatggatgg
gagatgtacgccataggagggagctcaaatcctactattctcagtgaaggaaactactac
gtggctccgaacaatcgagatgcaaaggaagttaccaaaagagaggaaggaaattggaag
aactggaaatggagatcaacaaaagacctctttctcaatggagcatactttgttccttcg
ggatggggaagctgcacacctgtttattcttcttcacagcagttctatgttgcaactgga
tcaatggttccattgttaactgcaaatgccggagttcttagttgttcgatggcaaagcca
tgcgtggtcggatatttactactgaagcagggaaagcagagaatgatagcgtcgaagagg
aaaggccaattttgtcgaaaagcaatagggatgaagattggatctcaggaatacgtaaac
aagaacccaaatgggcgaaacccaacaaaatctaataccaggcagaaccgaatcagctca
gtatggcccctcctccacacctccgtgattcatttcgacacgatatctacacgaaacacg
atttccaccgcgctcgtactggcgctctcgaatcaagaatcagtaacccatcggccgccg
gcgacagtcataggtgctgatgaatttctttctcgcagcgcattccggctacttccgaac
ttcgaccagtttcatcccaagtccattagggtgtga
DBGET
integrated database retrieval system
