Dendrobium catenatum: 110092110
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Entry
110092110 CDS
T05027
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dct
Dendrobium catenatum
Pathway
dct03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110092110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110092110
03036 Chromosome and associated proteins [BR:
dct03036
]
110092110
Transcription machinery [BR:
dct03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110092110
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110092110
PBAF complex
110092110
GBAF(ncBAF) complex
110092110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
DUF3958
Motif
Other DBs
NCBI-GeneID:
110092110
NCBI-ProteinID:
XP_020672157
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MTQCFDAGLSTRKCRERELYAIPISSSWFKWDEIHESERRSLPEFFEGGSYSRSPRVYKE
YRDFIINKYREDPSKRLTFTDVRKCVVGDVGSLRKVFLFLEKWGLINFSVSDGKQQSEED
DGPVVIVEVGPAAGVRVVSGSSSSSSSFVDSAQAGGESAFRLPPLTSYSDAFGEWKPGSG
LICGFCGGHYRSGLNESLNAGIAMCSKCLHKYTGNGKIEDDLTPNDHVDVKDQSSATCWT
DTETLLLLEAVLKHGDDWDLIAQHVRTKNKLDCISRLIHLPFGDHMLGTISTKSNNANLI
TPLVEYKPSLQVLNDNPQEFTETNGDQQVEINKVEGIETASQDHSVKRRCFPPFTDTTNS
FMKQVASFSTVCGPHVAAVALDAAIKALCQENPCAKMAFETNADKMVKPVSPPYKNEFKG
DIKFEDGDAKRNKQSAYVSEKSFGATTFQVRAAIATSLAAAAARAKLAADQEEREMELLM
ASIIQAQLKKLQYKMKHLMEIELIMEKELSYVQQMKEFVMEEWVNLLEKLFEAGIPRWRD
QVFPKTLVHTFPL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaatgcttcgatgcggggctgtcgacccggaaatgtcgagaacgggagctctac
gccatacctatctcttccagctggtttaagtgggacgagatccacgagtcagagaggagg
tcgctgccggagttttttgaagggggatcctactcgcggagtcctagggtttacaaggag
taccgggatttcattatcaataagtaccgcgaagacccctctaaacgtcttacatttacg
gacgttcgcaagtgtgttgtgggcgacgtcggcagtctccggaaggtctttcttttcttg
gagaaatgggggttgatcaattttagtgtgtccgacgggaagcagcagtcggaggaagat
gatggcccggttgttatcgtggaggttggtcccgcagcgggagtgcgggtggtgtctgga
tcgtctagttcttcatcttcttttgttgactcagcgcaagctgggggagagagcgctttc
aggctgccgcccctcacttcttattctgatgcttttggggaatggaagcctggtagtggc
cttatatgcgggttctgtggaggtcactatcgttctggattgaatgaatcattgaacgct
ggtattgcgatgtgttcaaaatgcttgcataagtacacaggaaatgggaaaattgaagat
gatttgacgccgaatgatcatgttgatgtaaaagatcaatcttccgccacctgttggacg
gacacagagactctacttcttcttgaagctgttctgaagcatggagatgattgggatctt
attgctcaacatgttcgaactaagaataaacttgactgtatttccaggctaatacatctg
ccttttggtgatcatatgttgggaactattagtacaaaatcaaacaacgcaaacttaatc
acaccattggtggagtataagcctagcttgcaggttttaaatgataatccccaggagttc
acagaaacaaatggtgatcaacaggttgaaattaacaaggtagaggggatagagacagct
agccaagatcattctgtgaagcgaagatgctttccacctttcactgatactacaaactca
tttatgaagcaggtagcatccttctctacagtttgtggcccgcatgttgctgctgttgcc
ctggatgctgcaatcaaggcattgtgccaagagaacccatgtgccaagatggcatttgaa
actaatgcagataaaatggttaagcctgtgtcgcctccatataaaaatgaattcaagggt
gacataaagtttgaagatggggatgctaagagaaataagcaatcagcttatgtctctgag
aagagcttcggtgcgacgaccttccaagttagagcagccattgcgacatctctggctgca
gcagctgctcgtgcaaagcttgcagcagaccaagaagagagggagatggaacttcttatg
gcatcaataattcaagcgcagctgaagaagttgcagtacaagatgaagcatttgatggag
attgagctgataatggagaaagagttgagttacgtgcagcaaatgaaggaattcgtaatg
gaggaatgggtgaatctactggagaaattatttgaggctggaataccccggtggcgtgac
caagtatttcctaagaccttagtgcacaccttccccttataa
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