Dendrobium catenatum: 110092146
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Entry
110092146 CDS
T05027
Name
(RefSeq) phytochrome A1
KO
K12120
phytochrome A
Organism
dct
Dendrobium catenatum
Pathway
dct04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110092146
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
PAS_9
HisKA
PAS_8
Motif
Other DBs
NCBI-GeneID:
110092146
NCBI-ProteinID:
XP_020672213
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MRERMSSSSPSQFCSSSSRSKHSSRITAQTNVDVKLDADFETMGTFFDYFQSVRPPPDKG
KSQKETAYLQGIQKGKLIQPFGCLLALDEKTFKIIAFSENAPEMLTMISHAVPSVGDHPA
LGIGTDVRSLFTPPGTAALRKALGFAEVSLLNPILVHCKTSGRPFYAIVHRVTGCLVVDF
EPVKPNDEPTSAAGALQSYKLAAKAIARLQSLPDGSMKKLCNTVVEEVFELTGYDRVMTY
KFHEDDHGEVYAEITKPGMESYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKIYQ
GEMLPFDISFCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNEGEDDDDDETGQNHQQQQ
KSKRLWGLVVCHNETRRFVPFPLRYACEFLMQVFAIHVNKEFELEKRVREKNILRTQTML
CDMLLRESFPLGIITKTPNIMDLVKCDGAAIIYQNKVWRLGITPSESQISNIAYWLDECH
MDSTGLSTDSLHEAGYPGALSLGDMVCGMAAARITSNDTLFWFRSPTATDIRWAGAKHDP
DGVDDERMMHPRSSFKAFLDAVKMKSQSWSDHEMDAIHSLQLILRGTFNGIESKIKKLTI
DSQMNDLKVDGMLELQVVTNEIVRLIETANVPILAVDIDGLINGWNMKIAELTGLSVDEA
IGKHLLTLAEDSSVDAMKKILLLALQGKEEQNVEFHLKTFGLPKDDGPIILVVNACTSRD
IHDNVIGVCFVAQDVTELKMIMDKFTRIEGDYKAIVQNPSPLIPPIFGADEFGWCSEWNL
AMANLSGWKRDEVIDKMLLGEVFGINMACCRMKNQDLFVNLCVLINNAMIDQEKEESSFS
FINRSGRHVECLLSVSKKVDAEGNTTGVFCFLHAASHELQQEMQIQKLTQQATIKRLKAL
AYIRNEIRNPLSGIMYSWKMLEGTNLGEERMLLLRTGAKCHYQLNRILDDLDLENIMDSC
LELEMNEFTLKDVVVTAVSQVMLPSMGKGIKLVSDLPEDLENEFVYGDSLRLQQILADFL
LVCVKHSPGGGQIEITAGLMKDKLGESLQLINMEIRIIHEGNIVPQELISQMFGSKEESQ
EEGMSLLVCRKLLKLMNGDVRYLREENKAAFILSAELASASKANAGKS
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaagaatgtcctcctcaagtccttcacagttttgttccagctctagcagaagc
aagcacagttctagaattacagctcaaaccaatgtcgatgtgaagctagatgctgatttt
gaaactatgggcactttctttgactattttcagtctgtcaggcctccacctgacaaagga
aagtctcagaaggagacagcttacctgcagggcatccaaaaggggaagctaatccagcca
tttggttgtttgctggctcttgatgagaaaaccttcaaaattatcgctttctctgagaat
gctcctgagatgctcaccatgataagccatgcagttcctagtgttggtgatcacccagcg
cttggcataggcactgatgtgaggagcctcttcactccccctggcactgcagcacttcgg
aaagcattaggctttgcagaggtttctctgttgaatccaattcttgttcactgcaagaca
tctggtaggccattctatgcaattgtacatagggttactggttgtttggttgtagatttt
gagcctgtgaagcctaatgatgagcccacgtctgctgctggggctttgcagtcctacaag
cttgctgctaaagcaatcgccagacttcagtctttacctgatgggagcatgaagaagctt
tgcaacactgtggttgaagaggtgttcgagctgacagggtatgacagggtaatgacttac
aagttccatgaagatgatcatggagaagtttatgcagagatcacgaagccaggcatggaa
tcatatttggggttgcattatccggctactgatatacctcaggctgcaaggtttctcttt
atgaagaataaggttcgaatgatatgtgactgccgagcaaaacatgtaaagatatatcaa
ggtgagatgcttccatttgatatcagtttttgtggcagtaccctccgggcacctcacagt
tgccatctgcagtatatggagaatatgaattcaatagcatctctggtcatggcagtgata
gtgaatgaaggagaagatgatgacgatgatgagactgggcagaatcatcagcagcagcag
aagagtaagaggctttggggtcttgtggtttgccataatgagactcgaaggtttgttcca
tttccattaagatatgcctgtgaatttttaatgcaagtctttgctatacatgtgaacaaa
gagtttgagctggagaaacgggtaagggaaaagaacatcctaagaacccaaacaatgttg
tgtgatatgctgctcagagaatcatttcctctaggaattatcacaaagactcctaacatt
atggatttggtcaaatgtgacggggccgcaattatttaccaaaacaaggtctggcggctg
gggattactccaagcgagtctcagattagtaacattgcttattggctcgatgaatgtcac
atggattctacggggttgagtacagatagcctgcatgaagctgggtatcctggcgctttg
tctcttggcgatatggtttgtggaatggctgcagctagaattacttctaatgacacactt
ttctggtttcgttcacccacagctactgacattagatgggcaggtgctaagcatgaccca
gatggtgtggatgatgagaggatgatgcatccaagatcctcattcaaggcatttcttgat
gctgttaagatgaagagccagtcatggagtgaccatgagatggatgccattcactccctg
cagcttatacttagagggacatttaatggcattgaaagtaaaatcaagaagttaacaatt
gattctcagatgaatgatcttaaagttgatggaatgctcgagcttcaagtagttactaat
gaaatagttcgtttgattgagacagcaaatgtgcccattctggcagtggatattgatggt
ctcataaatggatggaatatgaaaattgctgaattaactggcctttcggttgatgaagcc
atcgggaagcatttgcttactcttgccgaggattcttctgttgatgcaatgaagaagatt
cttcttttagcattgcaaggaaaggaggagcaaaatgttgaatttcatttaaaaactttt
ggtcttccaaaagatgatggtccaattattctggttgtgaatgcttgcactagtcgggac
atccatgataatgtcattggagtatgctttgtggctcaagatgttactgagcttaagatg
attatggataagtttacaagaattgaaggagactacaaggccatagtgcagaaccccagc
ccacttattcctcctatctttggtgcagacgagtttggctggtgttccgagtggaacttg
gctatggctaatctttcaggatggaagagagatgaagtaattgacaaaatgctcttggga
gaggtatttgggattaatatggcttgttgccgaatgaagaaccaagatttatttgtcaat
ctttgcgttttaataaacaatgcaatgattgatcaagagaaagaagagtcctcttttagt
ttcattaatcgtagtgggagacatgtagagtgtttgctgtctgtgagcaaaaaagttgat
gcagagggtaacaccactggagtattttgctttctccatgctgctagccatgaactccag
caagaaatgcaaattcagaagctaacacagcaagcaacaataaagagattgaaggcttta
gcatatataaggaatgaaattagaaatcctctctctggtattatgtattcatggaaaatg
ctagaggggaccaatttgggtgaagagcgaatgctactcttgcgcactggagcaaagtgt
cactatcagttgaacaggatccttgatgatttggacctagagaacataatggacagctgt
ttggagttggaaatgaatgagtttactctgaaagatgtggtggttactgcagtaagccaa
gtgatgcttccaagcatggggaagggaataaaattagtctctgacttacctgaagactta
gaaaatgaatttgtctatggggacagtctgaggcttcagcaaatccttgctgatttcttg
cttgtgtgtgtgaagcattcccctggtggagggcaaattgagataacggctggactaatg
aaagataagttgggtgaatctcttcagcttattaacatggaaatcaggataatccatgag
ggaaatatagtgccgcaggaattaatttctcaaatgtttggaagcaaggaagagtctcaa
gaagagggtatgagtctgctagtttgcagaaagcttctgaagctcatgaatggagatgtg
cgttatctgagggaggaaaacaaggcagccttcatcctctctgcagagctggcttctgct
tccaaagcaaatgcaggaaaatcttga
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