Dendrobium catenatum: 110092228
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Entry
110092228 CDS
T05027
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110092228
Spliceosome [BR:
dct03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110092228
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
DUF1180
PAF-AH_p_II
Motif
Other DBs
NCBI-GeneID:
110092228
NCBI-ProteinID:
XP_020672350
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MATANSFDILGDSENDDLSLLIAAQQKKLTAPSQAAPTPAAAKLPSKPVPPAQAVRESRS
NAAPIREGTGRGGSGRGRGGRGAGIGQNRDFENGNHSRYGGGRGGFAPENGDAGNPSERE
RESSGQHRGSFRGGRRGGYGSGTGEGGFDPERPQRRVYERRSGTGIGYEMKREGAGRGNW
GTVTDEVHAQETEDGVTLDVKVATPDKQVEQDDGNLADASKDKKEEAAREAEKEPEDNEM
TLEEYEKVREEKRKALLSMKVEERKVEIDKDLQSMQQLTIKKGNDDVFIKLSSDKDSPKL
RDNAEKEERARKAMNINEFLKPADGGRYYSPSGRGRGRGRGDRESFRGSYTGGASISPVI
PSIEDQGQFPALGAK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcaaactcctttgatatactcggagatagcgaaaatgacgatctttctctg
ctgatcgccgcccagcagaagaagctcacagcaccttctcaggcggcgcctactccggct
gcggcgaagctcccttcaaagccggttcctcccgcacaggccgtaagggagtcacggagt
aacgcggcgcctatacgcgaaggaactggtcgaggtgggtctgggcgtggtcggggtgga
agaggagctgggattggtcaaaatagggactttgaaaacgggaatcatagcagatatggt
ggtggtcgcggtggcttcgcacctgaaaatggtgacgctggtaatccttcagaaagagaa
cgagaaagctctggtcaacaccggggatctttccgtggcggccggcgtggtgggtatggg
agcgggactggggagggcggatttgatcctgagcgtcctcaaagaagagtttatgagcgt
cggagtggaactgggattgggtatgagatgaaaagagagggtgccgggcgtggtaactgg
ggtacagtcactgatgaagttcatgcacaggagactgaggatggagttactcttgatgta
aaggttgctactcctgataaacaagtggaacaagacgatggaaacttagcagatgcaagc
aaggataaaaaggaagaagcagcccgggaagcggagaaagaaccagaagataatgagatg
actctggaagagtatgagaaagtaagggaggaaaaaagaaaagccttactttctatgaag
gttgaggagcgaaaagtcgaaatcgacaaggacttacagtctatgcaacaacttactatc
aaaaaaggaaacgatgatgtttttatcaaactgagctctgataaagactcacctaaacta
agagacaatgctgagaaagaggaacgggccagaaaggctatgaacatcaatgagtttttg
aagccagctgatggggggagatattacagtccatccggccgtggtcgtggaagaggtcgc
ggtgatcgtgaatcattcagaggcagttacaccggcggggcatcaatctcgccggtcatc
ccttcaattgaagatcagggacagtttccagctcttggtgccaagtaa
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