KEGG   Dendrobium catenatum: 110092358
Entry
110092358         CDS       T05027                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 5 isoform X1
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
dct  Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:dct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dct03041]
    110092358
Spliceosome [BR:dct03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110092358
 Complex B
    110092358
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 RRM_MUD2_C zf-CCCH_DUS3L zf-CCCH_4
Other DBs
NCBI-GeneID: 110092358
NCBI-ProteinID: XP_020672524
LinkDB
Position
Unknown
AA seq 670 aa
MANPVNGEMSQEEAFAVCGGKQSRKEKRKVLKKLKRKQARRIAAIREREMAEFLLNDPEE
QLLLRLREQEEADNAEKERREYEERERVWLEAAAARKSREEEDERRKKLLQEEERKQNEH
DYGAEGDVEHEYVDEGPAEIIWQGNEIIVKKRRVKVAKKIVEQIPDKEDDDRPTSNTLPP
QSATFASYVQGETITAQEIIDSVAQKIPNFGTEQDKAHCPFHLKTGACRFGSRCSRVHFY
PEKSSTLLIKNMYNGPGLTCEQDEGLEYTDEEVDHSYEEFYEDVHTEFLKFGEIVNFKVC
KNSSYHLRGNLYVHYKSLESAILAFNTMNARYYGGKQIICEFVGVTRWKVAICGEYMKTR
LKTCSHGSACNFIHCFRNPGGDYEWADWDNPPPTYWIKRMIFLFGTSVESGYGKELDSED
YKRHREQERMRKPKNYRHQSERFHYKEMDLNNSSSDGEELNSKKLQQTRYSTKRDRSIKR
RGRLVSENKNELLSENHRSEERFHSKSFFSHCDDAGECTSKEAIEGSIKKHRRYVSKTPE
HDRRDESENRSSSSRRKIKLLYSDEKENSEPKSHKKQKKNQVKDRHLENSDWDSFRSKDQ
FNEECISEDPDSEKDSDGVRYHYSKRRKYDKHRSHRSHKHRYITDKVRKGGEESDGSPGR
WKVSEEDFSR
NT seq 2013 nt   +upstreamnt  +downstreamnt
atggcaaatcctgttaacggagaaatgtcgcaagaggaggctttcgctgtctgcggcggg
aagcagtctaggaaggagaagcgtaaggttctgaagaagctaaaaaggaagcaggctcgg
aggatagctgcgattagggagagggagatggcggaattcctcttaaacgatccggaggag
cagttattgctcagattacgggagcaggaggaggcagataatgctgagaaggagaggagg
gagtatgaggagcgggaaagggtatggcttgaggctgccgccgcaaggaagtctcgtgag
gaagaggatgagcgacggaaaaaactccttcaggaggaagagaggaagcagaatgaacat
gactatggggcagaaggtgatgttgagcatgagtatgttgatgaagggccggcggagatc
atttggcaaggaaatgagattattgttaagaaaagaagggttaaggttgcaaagaaaatt
gtggaacaaattccagataaagaggatgatgacagacccacatcaaatactcttcctcct
caatctgctacttttgcatcatatgtacagggtgaaacaattactgcacaagaaatcatt
gatagcgttgcacagaagattccaaattttggtactgaacaagataaggctcattgccct
ttccacttgaagactggagcctgccgttttggatctcgttgcagtagagttcatttttat
cctgagaagtcctccacattgctcataaaaaacatgtataatggtcctggtcttacttgt
gaacaagatgaggggcttgagtatacagatgaagaggttgatcattcttatgaagaattt
tatgaggatgtgcatacagaattcttgaagtttggtgaaattgttaattttaaggtttgc
aagaacagttcctatcatctacgaggaaatttatacgtgcactataaatcccttgagtct
gcaattcttgccttcaataccatgaatgctcgttattatggtggaaaacagatcatttgt
gaatttgttggtgtgacaagatggaaggttgccatttgtggcgaatacatgaaaacaagg
ctaaagacctgctcacatggaagtgcctgcaatttcatacattgcttccgcaatcctggt
ggagattatgagtgggctgattgggataaccctcctcctacatactggatcaagaggatg
attttcttattcggtacttcagtggagtcgggctatggcaaggaattggattcagaggat
tataagaggcatagagaacaagaaaggatgaggaaacccaaaaactacaggcatcaatcg
gaaaggtttcattataaagagatggatttaaacaatagcagttctgatggagaagaattg
aattcaaagaagcttcagcaaaccagatattcaactaaaagagatcgatccattaaaagg
agaggacgccttgtttcagaaaataagaatgagctgctttcagagaaccatagatcagaa
gagcgttttcattcaaaaagcttcttttctcactgtgatgatgctggtgaatgtacttcc
aaggaagcaattgaaggatcgatcaagaagcatagaagatatgtttcaaaaacgccagaa
catgatagaagagatgagagtgaaaacagatcctcatcaagtaggagaaagatcaagttg
ttatattcagatgagaaggagaattctgagcccaaatcccacaagaaacaaaaaaaaaat
caggtgaaggatcggcatttggagaattcagactgggattcctttagatctaaggatcag
ttcaatgaggaatgtatttccgaggatcctgattcagagaaagattctgatggggttaga
tatcattacagcaaaagaagaaaatatgataaacatagaagccaccgttcacataaacat
cgatatattactgacaaagtcagaaaaggtggcgaggaaagtgatggatctcctggtcgc
tggaaagtctccgaggaagatttttctcgctga

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