Dendrobium catenatum: 110092463
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Entry
110092463 CDS
T05027
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
dct
Dendrobium catenatum
Pathway
dct04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
110092463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_9
HisKA
PAS_4
Motif
Other DBs
NCBI-GeneID:
110092463
NCBI-ProteinID:
XP_020672678
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MSTSRPSQSSSSSSRSRHSAARAMAQTTVDAKLDSAFEAMGTSFDYSQSVRAPPDERRSA
KVTAYLQHIQRGKLIQPFGCLLALDEKTFKVVAFSENASEMLTMVSHAVPSVGDHQTLGI
GTDVKSLFTSPSTAALQKALGFPEVSLLNPILVHCKSSGRPFYAIVHRVTGCLIVDFEPV
KPSDVPMTAAGALQSYKLAAKAISRLQSLRGGSMKNLCKAVVEEVFELTGYDRVMAYKFH
EDDHGEVFAEIIKPGMEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRIYQDES
LPFDISFCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNGKDDDGDEAEQNQQEQKSKKL
WGLVVCHNETPRFVPFPLRYACEFLMQVFAIHVNKEFELESQIRQKNILRTQTMLCDMLL
RDSVPLGIITQTPNIMDLVKCDGAALVYQNKVWRLGVTPTESQIFDLANWLCNCHTDYTG
LSTDSLHEAGYPGAFSLCDVICGMAAARITSKDMLFWFRSPAATEIRWGGEKHDPSDKDD
GSRMHPRSSFKAFLDVVKMRSFPWSDHEMDAIHSLQLILRGTINGTDNSMKKATIDSKMT
ELKLEGMMELRVVTNEMVRLIETATVPILAVDVDGLINGWNMKIAELTGLSVDEAMGKHL
LTLVDDSSVDGVKKMLFLALQGKEVQNIEFQVKTFGIRRDDGPVILVVNACASRNIHDNV
VGVCFVAQDITSHKMIMDKFTRIEGDYKAIVQNPSPIIPPIFGADEFGWCSEWNLAMAKL
SGWNRDELIGKMLLGEVFGINMACCRIKNQDSFVNLSILINNAISCHEMEKRSFSFISRS
GRSVECLLSVSKKVDGEGNITGVVCFLHSNSHELQQVIQVQQLTQQTTMKKLKALSYIRS
EIRNPLSGIMYSQKILEGTELDEEQRLLLNTGAKCHYQLNRILNDLDLENIMDSCLELEM
DEFTLKDVVVTAVSQVILSSKEKGISVDYDIPDNLISEHVYGDSLRLQQILADFLLVCVK
HCPGGGQVEISAGLTKDKLGESLQLINLEIRITHTGFGVPEDLLSQMFGGKEDLSEEGMS
LLVCRKLLKLMNGDARYLREANKSAFILSAELACASKIRASRDK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtctacatcaagaccctcacagtcctcttctagctccagcagaagcaggcacagtgct
gctcgagcaatggctcagaccaccgtggatgcgaagcttgactctgcgtttgaagccatg
ggcacgtcttttgactactctcagtcagtaagggctccacctgacgaaaggagatctgcg
aaggtgactgcctacttgcaacacatccaaaggggcaagctaatccaaccatttggttgt
ttgctggctttagatgagaaaaccttcaaggtcgtagctttctctgagaatgcctcagag
atgctcactatggtcagccacgcagttcccagtgttggggatcaccaaacactcggcatt
ggaacagatgtgaagagcctctttacttcccctagtactgcagcacttcagaaggcgttg
ggctttccagaggtttctctgcttaatccaattcttgtccactgcaagagctctggtaga
ccattttatgctattgttcatagggtcactggttgtttgattgtagattttgagcctgtg
aagcctagtgatgtgcccatgactgctgctggggctttacagtcttacaaacttgctgcg
aaggccatctctaggcttcagtcattgcgtggtgggagcatgaagaatctttgtaaagct
gttgttgaagaggtgtttgagctgacagggtatgatagggtcatggcttacaagtttcat
gaagatgatcatggggaggtttttgctgaaattataaaaccaggcatggaaccatatctt
ggcctgcattatcccgctactgatatacctcaggctgcaaggtttctttttatgaagaac
aaagttcgaatgatctgtgactgccgagcaaagcatgtaaggatttatcaagatgagagt
cttccttttgatatcagtttctgtggcagtacacttagggcaccacacagttgccattta
caatatatggaaaatatgaattcaattgcttctctggtcatggctgtgatagtgaatgga
aaagatgatgatggtgatgaggctgaacagaatcagcaggagcagaaaagtaagaagctc
tggggactggtggtctgccataatgagactccgaggtttgttccattcccattaagatat
gcctgtgaattcttgatgcaagtttttgctatacatgtgaacaaagaatttgagttggaa
agccagattaggcagaagaatattctgagaacccagacaatgttgtgtgatatgctgcta
cgggattctgtccctctgggaatcataactcaaactcctaacattatggatttggttaag
tgtgatggtgctgcgcttgtttaccaaaacaaagtttggcgacttggggttactccaact
gagtctcagatttttgaccttgctaactggctttgtaattgtcacacagattacacaggg
ttaagtacagacagcctgcatgaagctggttatcctggtgccttttctctttgtgacgta
atttgtggaatggctgctgccagaattacttctaaggacatgcttttctggtttcggtcc
ccagcggctactgaaattagatggggaggtgaaaagcatgacccgtctgataaggatgat
ggtagtagaatgcatccaagatcctccttcaaggcttttcttgatgttgttaagatgagg
agctttccatggagtgaccatgagatggatgctattcattccttgcagcttatacttcga
gggacaatcaatggtactgataattcaatgaagaaggctacgattgattctaagatgact
gagctcaaacttgaaggaatgatggagttgcgagtagttacaaatgagatggttcgtttg
attgagacagccacggtgccaattttggcagttgatgttgatggtctcataaatggatgg
aatatgaaaattgctgaattaactggcctttctgttgatgaagccatgggaaaacatctg
ctcacccttgttgacgattcttctgtggatggagtcaagaagatgcttttcttagcacta
cagggaaaagaggttcaaaatattgaatttcaagttaaaacttttggtattcgaagagat
gatggcccagtcattctggtggtgaatgcatgtgccagcaggaacatccatgataatgtg
gtcggagtatgctttgtagctcaagatattaccagtcataagatgataatggataagttt
acacggatagaaggagactacaaagccatcgtgcagaaccccagcccaattatcccccct
atcttcggtgcagatgagtttggttggtgttctgagtggaatctagccatggctaagctt
tcaggatggaatagagatgaactaattggcaaaatgcttttgggagaggtgtttgggatt
aatatggcttgttgccgtataaagaaccaagattcatttgttaatctcagcattctaata
aataatgccatcagttgtcatgagatggagaagcgttccttcagtttcatcagccgcagt
ggtagatctgtggagtgtttgctctcagtcagcaaaaaagttgatggggaaggtaacata
actggagtagtttgctttctacattcaaatagccatgagctccagcaagttatacaagtt
cagcagttgacacaacaaaccacaatgaagaagttaaaggctttatcatatattaggagt
gaaattagaaaccctctctccgggattatgtattcacaaaaaatactggaggggactgag
ttggatgaagaacaaaggctacttctgaacaccggagcaaaatgtcactatcagttgaat
aggatcctcaatgatctagacctagagaacataatggacagctgtttggagttggaaatg
gatgaatttactttaaaagatgtggtggttactgctgttagccaagtaatactttcaagt
aaagaaaagggaataagtgttgactatgacatacctgataacttaataagcgaacatgtc
tatggagacagtctaaggcttcaacaaatccttgctgatttcttactggtctgtgtgaag
cattgtccaggtgggggacaagtggagatatctgctgggctgacgaaggataagttgggt
gaatctcttcagctgataaacttggaaataaggataacacatacaggatttggagtgcca
gaagatttactttcccagatgtttggagggaaggaagacctctcagaagagggtatgagt
ctgctggtttgcagaaagctccttaagctcatgaatggagatgcacgttaccttagagaa
gcaaacaagtctgccttcatcctttcagcagagctggcttgtgcctctaaaattagagct
agtagggataaatag
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