Dendrobium catenatum: 110092509
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Entry
110092509 CDS
T05027
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
dct
Dendrobium catenatum
Pathway
dct03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110092509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110092509
03036 Chromosome and associated proteins [BR:
dct03036
]
110092509
Transcription machinery [BR:
dct03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110092509
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110092509
PBAF complex
110092509
GBAF(ncBAF) complex
110092509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
110092509
NCBI-ProteinID:
XP_020672748
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MSSNNLNNANPPRPIAGSPLAGGMSSSPVTPLPHLRPPPQPQPSSASPFQNFFQSQSLQS
HLAAQSQASMLGPGASTPSPGLSGGPKRPPQKPPPRPALPASSVAAVHSFKSAELTPAIR
RKKRKLPEKHLPDRVAALLPESALYTQLLEFEARIDAALSRKKVDIQESLKNPPTLQKTL
RVYVFNTFSSQNRLGLDPKNAEPPSWSLKIIGRILEDGVDPNSAEALANPNPAYPKFSSF
FKRVTIGLDPMLYPENPTIIWENARSPAPHEGFEIKRKGDKEFNVNIRLEMSYNPEKFKL
SPALMEVLGIEVDTRARIINGIWHYVKAKKLQNPSDPSFFTCDPPLKKVFGDDKMKFSLV
SQKISQHLSPPQPIHLEHRIRLSGNGPAGHACYDILVDIPFPVQKEISAFLANTEKHKEI
EACDEVICASIKKIHEHRRRRAFFLGFSQSPVEFINALIASQSRDLKLVAGEASRNVEKE
RRADFYSQPWVEDAVIRYLNRKPAGGNDAPSST
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaacaacctcaacaacgccaaccctccacgacccatcgccggctcaccactt
gccggcggcatgtcctcttcccctgtaactccgcttccccacctgcgcccccctccacaa
ccccaaccctcttcagcctcccctttccaaaactttttccagtcacaatccctacaatcc
caccttgccgcccagtcccaggcttccatgctgggccccggtgcctctaccccctcccct
gggctctctggtggccccaaaaggccccctcagaagcctccacctcgtcctgcactgccg
gcatcatcggtggctgctgttcacagcttcaaatctgcagaactaactcctgcaatccgc
cggaagaagaggaagctccctgagaagcatctaccagatcgcgtagctgccctgctgcca
gaatcagctctctatacccagttgcttgaattcgaggcacggattgatgccgccctttca
aggaagaaggttgacatccaggaatccttgaaaaatcctcctacattgcagaaaaccctt
agagtttatgttttcaatactttttccagtcagaataggttgggtttggatccaaagaat
gctgagccgccatcttggtctctcaagataattgggaggattttggaggatggggttgac
cccaattctgcagaggctttggctaatccgaatcctgcgtatcctaagttctcatctttt
tttaagagagttactattggtctagaccctatgctttacccggagaatccgacaattatt
tgggagaatgcaaggtcgcctgctcctcatgagggctttgagattaagagaaaaggggat
aaggaattcaatgtgaatatacggcttgaaatgagttataatcccgagaaattcaagtta
tctcccgcactgatggaggttcttggcattgaagtggacactcgagctagaattataaac
gggatttggcactatgttaaggctaagaaattgcaaaaccctagcgatccttcgtttttt
acctgtgatccaccattgaagaaggtgtttggagatgataagatgaagttttcattggtt
tcgcagaagatttctcaacacctgtcacccccgcagcccatacatttggagcacaggatt
aggctttctggtaatggtcctgcaggccatgcttgctatgatattttggtcgatattcct
ttccccgtgcagaaggaaatttctgctttccttgcaaatacagagaaacacaaagagatt
gaggcttgtgatgaagtgatttgtgcttcaattaagaagatccatgagcatcgacgaagg
agagcattctttcttggttttagccagtcaccagtggagtttataaatgctctaattgct
tctcaaagtagggacttgaagcttgttgctggagaagcaagtcgtaatgttgagaaggaa
cgccgtgcagacttctacagtcaaccatgggttgaagatgctgttatccgttatttaaat
cgtaaaccagcaggtggtaatgatgctcctagtagcacatga
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integrated database retrieval system
