Dendrobium catenatum: 110092559
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Entry
110092559 CDS
T05027
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
dct
Dendrobium catenatum
Pathway
dct03030
DNA replication
dct03420
Nucleotide excision repair
dct03430
Mismatch repair
dct03440
Homologous recombination
dct03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110092559
03420 Nucleotide excision repair
110092559
03430 Mismatch repair
110092559
03440 Homologous recombination
110092559
03460 Fanconi anemia pathway
110092559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dct03000
]
110092559
03032 DNA replication proteins [BR:
dct03032
]
110092559
03400 DNA repair and recombination proteins [BR:
dct03400
]
110092559
Transcription factors [BR:
dct03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110092559
DNA replication proteins [BR:
dct03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110092559
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110092559
MMR (mismatch excision repair)
110092559
DSBR (double strand breaks repair)
HR (homologous recombination)
110092559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
110092559
NCBI-ProteinID:
XP_020672816
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MAARLTPNGIAAINAGDLDLKPVFQVMEVTKITGSQERFRIMVSDGTTTQHALLATQLNE
VARAGKVRRGSVVQLLEYICSTVQSRRMIVILNMEVLIMESEVFEKLESHPEAESANQKA
SLLNNSGFQGDQLPNGTSVSSSNKGQSYQPIVQPSYKPPPNYKGHGAIMKNEAPARIIPI
AALNPYQGRWAIKARVTAKGELRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAIVDRFY
GVIEVGKVYVICKGSLKPAQKNFNHLCNDWEIFLETSSVVELCPEEDGSIPAQQFNFKAI
SDIVNAENNSIVDIIGIVMSINPSVTILRKNGMETQRRVANLKDKSGMSVELTLWGDFCN
REGRQLQELLDSGAFPSLAVKAGKVSDFSGKSVGTISASQLFISPEIPEALSLIEWFDKG
GKNISSNSISRETMAGLPLNEIRKNVSQIKDEGLGRGVKPDWVTLKATVSFVKTENFCYT
ACPLVIGDRQCNKKVTKLNNGNWCCERCDREFEECEYRYLLQAQVQDHTGVTWVTAFQDS
GEDMLHCSAKELFMFKQHDDAKFAEIIRSFLFVQFLFRIKIKEEHYGDEQRLKITIVNAE
KVDPSTESKYLLDEISKFNHRTF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaggctgacgccgaacggcatcgccgccatcaacgccggcgatctggatctt
aaaccagtgtttcaggtgatggaggtcacgaagataacaggatcgcaggagaggtttcgg
attatggtgtccgatggcaccacgactcagcacgcgttgcttgctacgcagctcaacgag
gtagcgagggctggaaaagtacgtcggggatcagttgttcagctgctggaatacatatgt
agcactgttcaaagtcggaggatgattgtcatactgaacatggaagttttgatcatggaa
tctgaggtatttgaaaaattggaaagccatcctgaagcagaatctgctaaccagaaggca
tccttattaaacaactcaggcttccaaggtgatcaactgcctaatggtacatctgtaagt
tcgagcaataagggccaaagttatcaaccaattgtacaaccttcttataagccacctcca
aattacaaaggccatggggcaattatgaagaatgaggctcccgcacggattatcccaatt
gcagctctgaacccgtatcaagggagatgggctatcaaggcaagagtgacagcgaaagga
gaacttaggaggtataataatgcccgcggagatggtaaagtgttttcctttgatcttcta
gactccgatggaggagagattcgagtcacttgcttcaatgctattgttgatcgcttttat
ggagttattgaggtaggaaaggtgtacgtgatatgcaagggaagcctaaaacctgctcaa
aagaactttaaccatctttgcaatgactgggaaatatttctagagacatcctcagttgtt
gagctttgtccagaagaagatggctcaatacctgcacaacagttcaatttcaaagcaata
agtgatatcgtgaatgcagagaacaattcaattgtggatattatcggaatagtcatgtca
atcaatccttcagtaactatattgaggaagaatggtatggaaacgcagaggagagttgct
aatttgaaggacaagtcaggtatgagtgttgagcttactctttggggggatttctgcaac
agagaaggcagacaactacaggagttgcttgattctggggcttttccatctttagctgtg
aaggcaggaaaggtaagcgacttcagtggaaagtcagttggtaccatctctgcatcccag
ctctttataagccctgaaattcctgaagctcttagcttgatagagtggtttgataaggga
ggtaaaaatatttcctccaattccatctctagagaaactatggccggacttcctttgaat
gaaattcgtaaaaatgtttctcagatcaaagatgagggtttgggaagaggtgtcaagcct
gattgggtcacattaaaagcaactgtctcatttgtaaagacagaaaatttctgctacact
gcgtgccccttagtaattggtgataggcaatgcaataagaaagttacaaaactgaataat
ggaaactggtgctgtgaacgctgtgatagggagtttgaagaatgcgaatatcggtatctc
cttcaagctcaggtacaggaccatactggagtaacttgggtcactgcctttcaagactca
ggagaggacatgcttcactgctcagccaaggaattattcatgtttaaacagcacgatgat
gcaaaatttgcagagattattcggtcttttctctttgtgcagttccttttccgaatcaag
atcaaagaagagcattatggagatgaacagcggctgaagattacaatcgtcaatgcagaa
aaagtggacccttcaactgaaagcaaatacctactagacgaaatctcaaagttcaatcat
agaacattctaa
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