Dendrobium catenatum: 110092561
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Entry
110092561 CDS
T05027
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110092561
Transcription machinery [BR:
dct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110092561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
DUF7722
Motif
Other DBs
NCBI-GeneID:
110092561
NCBI-ProteinID:
XP_020672818
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MGVVTVSSTPSRTSPLGIGSGYSAGWSHPLRRRPVSIVAFKSSDPNLVKPLTKSRKQPKR
TQSVSLESASASPSLSTVDVDYSEVAEALENIYKLSPAEVSDMEFDFNLGRGGHTRKRVK
QSVEGEEGIVINGKRRMRRLSLDARIALRRTRKEEGDVFARDGVRKRATEGEMEEVELDK
LLREYSVSIDLVSLDWRKMKIPPVLSFAEHKWLFKLMQPTKGILKVKENLHGDLSREPTN
GELAEAVNMNVKKLKRELEVGHAARNKIIKHNLRLVLFVINKHYQDIANAQKFNDLCQAG
VKGLIMAVDRFEPKRGLRLSTYALFWIRHSIVRSMTLSSFTRVSFGIEAVRQEIQKVKLE
LAVQLQRSPTDEEIIERMRISPERYYVVLKTSKSVRSLNGRHTVTQEEFIDGIADIDGVG
GDKRRQPALRLAIDDVLDSLKPKESLVIRQRYGLDGKGRRTLGEIAGNLNVSREMVRKHE
LKALMKLKHPARLDYLRRYI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtagtcaccgtttccagcacgccgtcgaggacatcgcccctcggcatcggctcc
ggttactccgccggctggtcgcatccgctccggcggcgtccggtctccatcgtcgccttc
aaatcatcggatccgaacttggtaaagcccttaaccaaatctagaaagcaaccgaagcga
acccagtctgtttccctcgaatccgcctctgcttccccttcattgagcacggtggatgtg
gactacagtgaggttgccgaggcgctagagaacatctataagctgagcccggcagaggtt
tctgacatggagttcgatttcaatcttggtcgtggggggcacacgaggaaaagggtcaag
cagagcgtggagggagaagaagggatcgtgataaacgggaagaggaggatgagaagattg
agtttggatgcgaggattgccttgcggcgtacaaggaaggaggaaggagatgtatttgcc
agagatggtgtgaggaagagggccacggagggggagatggaggaagtagaattggataag
ttgttgagggagtattctgtatcgattgacttggttagtttggattggaggaagatgaag
attccgccagttctctcttttgctgagcataagtggcttttcaagctgatgcagcctacg
aaggggatactaaaggtgaaagagaatctacatggggacttgagtagagaaccgacaaat
ggagagttagcagaagcagttaacatgaatgttaaaaaattgaaaagagagttagaagtt
ggtcatgctgcaagaaacaaaattatcaagcacaatcttcggctggtcttgtttgtgatt
aacaagcattatcaagacattgcaaatgctcaaaagttcaacgacctttgtcaagcagga
gtgaagggacttattatggcggttgatcgctttgaaccaaagcgtggtctgcggttgtct
acttatgctctcttttggattcgacattctatagttagatctatgacactctcaagtttc
acccgtgtttccttcggtattgaggcggtcagacaagaaatccagaaggtcaaactagaa
ctggccgtccaactccagaggtcaccaactgatgaagagataattgaaaggatgagaata
tcacccgagagatactacgtggtgttaaagacctcaaaatcagtacgttctctcaatgga
aggcatacagttacacaagaagaatttattgacgggatagcagacatagatggtgtgggt
ggcgacaagcgtagacagcctgctctccgtctagctattgatgatgtgctcgattcactt
aagccaaaggaaagcttggtcattagacaaagatacggattagacggcaaaggaagacga
accttgggagagatagcaggaaacctcaatgtatcgagggagatggttcgaaaacatgag
ctgaaagcgttgatgaagctcaaacatccagctcgacttgattaccttcgcagatatatt
tga
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