Dendrobium catenatum: 110092697
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Entry
110092697 CDS
T05027
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dct03036
]
110092697
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dct04812
]
110092697
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
110092697
Cytoskeleton proteins [BR:
dct04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
110092697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT_EZ
HEAT
TOR1L1_N
Vac14_Fab1_bd
UTP20
HEAT_2
INTS1_R4
Adaptin_N
PDS5
Sec7-like_HUS
Cnd1
TPR_TTI1_C
MMS19_N
HEAT_DAAF5
HEAT_Maestro
Tra1_ring
Dopey_N
Motif
Other DBs
NCBI-GeneID:
110092697
NCBI-ProteinID:
XP_020673009
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MEEALEMARAKDTKERLAAVERLHQSLESSRRSLSAGEVSSLVDCCMDLLRDNNFRVAQG
ALQALSSAAVLAGEHLKLHINGLVPAIVERLGDGKQPVRDAARQLLVTLMEVSSPTIIVE
RAGAYAWTHKSWRVREEFARTVSTAVSLFASTELTLQRVLLSPVLQLLNDPNLSVREAAS
SSIEEMYTQVGPQFLEELNRHQLPSSMMKDISARLARIEPKVHQSDGAGAHFISTEIKSS
NVSHKKGSPRTKSTPRETSLFGGEADGTEKPVEPIKVYSEKELIREFEKIASTLVPEKDW
SLRISAMQRIEGLIYGGAADYPSFHMLLKQLVSPLSTQLLDRRSSIVKQACHLLCFLSKE
LLSEFEAHAEMFIPVLFKLVVITVLVIAESADNCIKTMFRNCKVARVLPRLVESAKNDRN
AVLRARCCEYALLILEYWADAPELQRSAELYEDLIKCCVADAMSEVRSTARTCYKMFSKT
WPERSRRLFLSFDPAIQRLINDEDGGIHKRYASPLLRDRGLQPSRVPSHAVTVNVPGFST
SAIVAMDRSSSVTSGMSLSTGTHALSQMKLREKGSERSLESMLQASKQKVSAIESLLRGV
SLSDKQRNSSTHSTSLDLGVDSPSSRDPPVPAAIPGSNHRLSTRSVLADPTFVSIARSST
RNGSSSLTEVINSNNQYVGGHSKYDNLASDSLSSFSLPYMVKRHAERPLDGSTVERNIDL
SFKKLSNMHLDRQFMDAANKDAGFRDLNNNYVPNFQRPLLRKQATGRVSASRRRSFDDNQ
SHLGELSSYVDGPTSLGDALSEGLCSSSDWVARVSAFNYLRNLLQQGPRGIQEVTQNFEK
VMKLFFRHLDDPHHKVAXAALSTLAEIIPQCRKPFESYLERILPYVFSRLIDPKELVRQP
CMTNLEIVNRTYGIDSLLPALLRSLDEQRSPIAKLAVVEFANNSFDNHSPNPDGYSNGGI
LKLWLAKLAPLVTDKNTKLKEASISGIISVYTHDSAAVLNFILSLSIEEQNLLRRALKQF
TPRIEVDLVNVLQSKKERQCSKAVYDPADVIGTSSDYGYNGLSKKSQLLGKYSGGLLDVD
GGKKWDSMQESILVDALIAKTTSDDSRQIYHNLETGSDNEVLGPHSKDLRHSTDVFSENT
FSWINHTENLTLLXDYESSMGNQQLDITQMIGSDGSKDIGSTFGGERLHDIELFHEKATS
SINAEAESELSIPQILHHICSISGEKSSISKHEALQKLVGASIANDNSIWAKYFNQILTA
VFDVLDDHNSSTRELALSLILEMLNHQKEAMEDSVEVVIEKLLNVANDSVAKVSNEAHQC
LTIVLTKYDTFRCLSVIVPLLASDDENMLVTCINCLTKLVSRLSQEELLSQLPLFLPSIF
DAFGSQSLDVRKGVVFCLVDIYILLGKSFLPYLEGLSSTQLRLFTIYANRISQARSIATG
EAKHG
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcgctcgagatggcgcgggctaaggatactaaggagcggttggcagccgtt
gagcggcttcaccagtctctggagtcgtctcgtcggagtctttctgctggcgaggtatct
tcgcttgtcgactgctgcatggatctactgcgggacaacaattttcgggtggcacagggg
gcgctgcaggcgctctcctccgccgccgttctcgctggcgaacacctcaagctccacatt
aatggtcttgtacctgcgattgtggagcgccttggagatggaaagcagcccgttcgtgac
gccgcgcgccagctccttgtcactctcatggaggtatcctcaccaacaattattgttgaa
agggctggagcctatgcttggacccacaaaagctggcgagttcgagaagagtttgcacgt
acggttagcactgcagttagcctatttgcttccacagaacttactttgcaacgagttcta
ctttctccggttctgcaattgcttaatgatccaaaccttagtgttcgagaagctgctagt
tcctcaattgaggagatgtacacccaggttggacctcagtttctcgaagaactgaaccgt
caccagctcccatcatccatgatgaaagatattagtgctagactggcaagaatagaacca
aaagttcaccaatcagatggagctggagctcatttcatctccaccgaaattaagtcatct
aatgttagccacaaaaaaggcagtcctaggactaagagtactcccagggaaacctcactt
tttggaggggaagcggatggcactgaaaagcctgtggaacctattaaggtgtattctgag
aaggaactcattagggaatttgagaagattgcatctactttagtgcctgagaaggattgg
tcactccgaatctcagccatgcagagaattgaaggcctaatttatggaggtgcggctgat
tacccatcctttcacatgctcttaaagcagcttgtttctccattaagcactcagctgttg
gatagacgatcaagtatagtgaaacaggcttgccatttgctatgctttttgtccaaggaa
cttttgtctgaatttgaggctcatgctgagatgtttattccggtactttttaagcttgtt
gtgataactgtacttgtgatagcagaatctgcagacaactgtataaaaacgatgtttcga
aactgtaaggttgcccgtgttcttccacgcttagtggaatctgcgaaaaatgatagaaat
gcagtactccgtgccaggtgttgtgaatatgcacttttaattctggagtactgggcagat
gccccagaattgcaaagatcggcagagctttatgaagatctgataaaatgctgtgttgca
gatgcaatgagtgaggtccgttcaaccgcacggacttgctacaaaatgttctcaaaaact
tggccagaacgttctcggcgtttatttttatcctttgatcctgccatacaaaggttaata
aatgatgaagatggtggcatacataaaagatatgcatctccattgcttcgtgatagagga
ttacagccttcacgtgtgccatctcatgctgttacagtgaatgttcctggattttctact
tccgccattgttgcaatggatagaagttccagtgttacttcaggaatgtcactttccaca
ggaacccatgctttatcacaaatgaagctacgtgaaaaaggttctgaaagaagccttgaa
agcatgcttcaggcaagcaaacaaaaagtctcggccattgaaagcttactgagaggtgtt
agcttatcagataaacaaagaaattctagtacacattcgactagtttggatctaggggtt
gattccccatcttctcgtgatccaccagtcccagcagctattcctggttcaaatcatcgt
ctctctacaagatcagtattggctgatccaacgtttgttagcattgccagaagtagcact
aggaatggtagctcaagtttgactgaagttataaattcaaataaccaatatgtgggcggt
cattctaaatatgataatctagcatctgattcattgtcttctttttcattaccttacatg
gtgaaaagacacgctgaaaggccactagatggaagtaccgttgaacgaaatattgatctc
agttttaagaaactttcgaacatgcacttagatagacagtttatggatgcagctaataag
gacgctggcttcagggatctaaacaataattatgttccaaattttcagaggccacttctt
agaaagcaagcaactggaagggtttcagctagtcggagacgcagttttgatgataaccag
tctcatttgggtgaattatccagttatgtggatggtccaacatcccttggtgatgcactt
agcgagggtttgtgctctagttcagattgggttgccagggtgtctgctttcaactatttg
agaaacttgttgcagcaagggcctagaggtatacaagaagttacacagaactttgagaag
gtcatgaaactattctttcgacacttggatgatccacaccataaagttgcgtaggcagct
ctttcaacacttgcagagattatcccccaatgcaggaagccttttgaaagctaccttgag
agaatcttgccatatgtattttcaaggttgattgaccccaaggagctggttaggcaacca
tgtatgacaaacttggaaattgttaataggacatatggcattgattcgttgttacctgca
cttcttcgttcactggatgaacagaggtcccctatagcaaagctggctgttgttgagttt
gcaaataattcctttgacaaccattcaccaaaccctgatggttatagtaatggtggcatt
cttaaattgtggcttgctaaactggcccctttagtaaccgataaaaatactaaactgaaa
gaagcttccatatctggaataatatctgtttatacccatgattcagccgccgtcttgaat
tttatccttagcttatccatagaagaacagaacttgttgagacgggcattgaaacagttc
actccccgcattgaggttgacctagttaatgtcctgcagagcaagaaagaaaggcaatgc
tctaaagctgtttatgacccggcagatgtgattggaacttcctcagattatggctacaat
ggattatcaaagaagagccagcttcttggtaagtattcaggaggattacttgatgttgat
ggtgggaagaaatgggattctatgcaagaatcaattttagttgatgccttgattgcaaag
acaacttcagatgacagtagacagatataccataaccttgaaacagggtctgacaatgag
gttcttggtccacatagcaaagatttgaggcatagcacagatgtattttctgaaaatact
ttttcatggataaatcacactgaaaacctgactctcttantggattatgagagctctatg
ggaaatcaacaacttgatatcacccaaatgattggttctgatggttctaaggacataggg
tcaacttttggtggggaaagattgcatgatattgagctctttcatgagaaagctacttca
tcaatcaatgcagaagcggaaagtgaactaagcattcctcaaattcttcaccatatatgc
agcatcagtggtgagaaatctagtataagtaaacatgaagctctgcagaaactggttggg
gcttcaattgccaatgataactcaatatgggccaagtacttcaatcaaattttaacggct
gtctttgatgttttggacgatcacaattcttctacaagggagcttgctctttctttgata
ctcgaaatgctcaaccatcagaaagaggccatggaagattcagttgaagttgtcattgaa
aaattacttaatgtggctaatgattcagttgcaaaggtttcaaatgaagcgcaccaatgc
ttgacaattgtgctaaccaagtatgacacgtttagatgcctttctgttattgtacctttg
ctggctagtgatgatgaaaacatgcttgttacttgcatcaattgtttgaccaagctggta
agccgcctttcgcaagaggagctgctgtctcaattgcctttatttcttccttctatcttt
gacgcatttggaagtcaaagcctggatgttcgaaagggtgttgtgttctgcttggtagat
atctacatcttgcttggcaaatcattcttaccatacctggagggactaagcagcacccaa
ctccgcttatttaccatatatgccaaccgtatttctcaagcgaggtccattgctacaggt
gaagctaaacatggctga
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