Dendrobium catenatum: 110093303
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Entry
110093303 CDS
T05027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 1
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110093303
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110093303
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
Helicases
110093303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
110093303
NCBI-ProteinID:
XP_028552293
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MAEGRPKTLPVLPWMRNPVDIELFDNCPLGFIPLLDPRLMEALQKMDIQSLFPVQVAMWQ
ETIGPGAFERDICVNSPTGTGKTLAYALPIVQILSTRKIRCLRALVVLPTRDLALQVKEV
FDAIAPAVGLSVGVAVGQSSIADEVSKLIEHPRLDMFSAFDPEVWQTKLQSSVDILVATP
GRLIDHINTTKGFSLEHLCYLVVDETDRLLREAYQSWLPTVIQLSCSKNQAGFKEDEIVS
STLNYLTTIRRGGVERGFKGKCYPRLVKIIMSATLTQDPSKLSQLDLHHPLLLTSGDRRY
KLPEKLESFKLICESKLKPLYLVVLLQELRGEKSIVFTSSVESTHRLSKLLNLFGELPCK
VKEYSSLQHQSVRSKRLKAFREGKIEVLIASDAMTRGMDVEGVRNVINYDMPTYVKAFVH
RAGRTARAGNKGRCFTLLRKDEVKRFGNILSKAGMMVCNVHPLPANSVERLRPVYSSALE
KLKQSLDSKRGRKYSVRLNSAEAGEK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggcggcccaagaccttgccggtgctcccatggatgcggaatcctgttgac
atcgaactcttcgacaattgccctctcggttttattccactcttagatccaagattaatg
gaggctttgcagaaaatggatatccaatcactatttcctgtgcaagttgcaatgtggcag
gaaacaattgggccgggcgcgtttgaaagagatatttgtgtcaactcgccaaccgggact
ggcaagacattggcctatgctttacccatcgtgcagattctctcaactcggaagattaga
tgtttgcgtgcattggttgttttgcctactcgagacttggctttacaggttaaagaagtt
tttgatgccattgctcctgcagtaggtctgagtgtaggagtagctgtcgggcaatcatct
attgcagatgaagtttcaaagctgatcgagcaccctagacttgatatgttttcagctttt
gatccggaggtttggcaaactaaactgcaaagttctgtggacatattagttgcaacacca
ggaaggctgatagatcatattaatacaacaaaaggtttcagtctggagcatctatgttat
ttggtagtggatgagacagataggctgttaagggaagcatatcagtcttggttaccaaca
gtaattcaactttcttgttccaaaaatcaagcaggttttaaggaagatgagatcgtctct
tcaacgcttaattatttgaccaccataagacgaggtggtgtggaaagaggatttaagggt
aaatgttatccaaggttggttaagattataatgtctgctacgctgacacaagatccaagc
aagctttctcaacttgatttgcaccatcctttgttgttaacaagtggagatcggcggtac
aagttacctgaaaaactggagtcattcaaactaatttgtgaatcaaagttgaagccattg
tatttagttgtgcttttgcaagagctaagaggggaaaaatcgatagtttttacatcatca
gtggagtcaactcacaggctttccaaattacttaatttatttggagaattaccatgcaag
gttaaagagtattcaagtctacaacaccaatctgtccgaagcaaaaggttgaaggccttc
agggaaggtaaaatcgaggttcttattgcttcagatgcaatgactcgtggaatggatgtt
gaaggagtgagaaatgttattaactatgacatgcctacttatgttaaggcattcgtccac
cgtgcaggtcggactgcacgagcgggaaacaagggccgttgctttactttactgagaaaa
gatgaggtcaaacgctttgggaacattctcagcaaggctggcatgatggtctgtaatgtt
catcccttacctgctaattcagttgaacgcctgaggcccgtttattcttctgcgctggag
aagctgaagcagtctttggactctaaaagaggaagaaagtacagtgtcagattaaattca
gcagaagctggtgaaaagtag
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