Dendrobium catenatum: 110093923
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Entry
110093923 CDS
T05027
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110093923
Spliceosome [BR:
dct03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110093923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
110093923
NCBI-ProteinID:
XP_020674640
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MTEPSKVIHVRNVGQEISENDLLQLLQPFGVVTKLVMLRAKNQALLQMYDISSAASALQY
YSNVQPSVRGRNVYMQFSSHQELTTVDQGSQGRKDQDLDPNRILLATIHHMLYPITVEVL
HQVFSPHGFVEKIVTFQKSAGFQALIQYQSLQCAVLARNTLQGRNIYDGCCQLDIQYSNL
NELQVNYNNDRSRDFTNPSLPSEQRGRSSQLGYGDAGGLYALHPSGGRAVTMAQMNNAAA
VAAAFGSGLPPGISGSNDRCTILVSNLNTDKVDEDKLFNLFSMYGNIVRIKLLHNKPDHA
LVEMGDGFQAELAVHFLKGAMLFGKKLEVNYSKYSNITPAQDAHDYGGSSLNRFNRNAVK
NYRYCCAPTKMIHISTLPQDITEDELISHLEEHGTIVSTKIFEVNGKKQALILFEDEEQA
TEALVCKHACNIDGNTIRISFSQLQSI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacggagccctccaaagttattcacgttcgcaatgtcgggcaagagatttccgagaat
gacctgcttcaattgttgcaaccgtttggcgtggttactaagcttgtgatgttacgcgcc
aaaaaccaggcgcttctccaaatgtatgatatatcttctgctgctagcgcacttcaatac
tactcaaatgtccaacccagtgtcaggggcagaaatgtttatatgcagttttcttctcat
caggaactaacaactgttgatcaaggttcacaaggacgaaaagaccaggatttggatccc
aatcgaatcctgttagctacaattcatcacatgctctaccctataacagtggaagttctg
catcaagttttttctcctcatggttttgtggagaagatcgtcacatttcagaagtcagct
ggatttcaagctctcattcagtatcaatcactccaatgcgctgttctggcaagaaacact
ctgcaaggacgcaatatatatgatggctgctgtcaattagatatacagtattccaacctt
aatgagctgcaggttaattataacaatgatagatcaagagatttcacaaatccatcacta
ccttctgaacaacggggtagatcatcacaacttgggtatggtgatgctggaggcctttac
gcacttcatccatctggaggcagagcggttacaatggctcagatgaacaatgctgcggca
gttgcagctgcttttggtagtggtctgcctcccggtataagtggtagtaatgacaggtgc
accatacttgtctctaacctcaatactgataaagtcgatgaggacaaacttttcaacttg
ttttccatgtatggtaacattgtaagaatcaaattacttcacaacaaaccagatcacgct
ctcgttgagatgggggatggttttcaagctgaactagccgtgcactttctgaagggcgca
atgttatttggtaaaaagcttgaggtgaattactccaagtactcaaacattacccctgcc
caggatgcccatgattatggtggatcaagccttaaccgcttcaaccgcaacgcagtgaag
aactaccgctactgctgtgccccaactaaaatgattcacatatccactcttccacaagat
atcactgaagatgagctcatctctcatctggaagaacatggaaccattgtgagcaccaaa
atatttgaggtgaatggtaagaagcaagccttaatcctgtttgaagatgaggagcaagcc
accgaggcccttgtttgcaagcatgcttgcaacattgatgggaacaccattcggatttct
ttctcccagttgcagagtatctag
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