Dendrobium catenatum: 110093939
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Entry
110093939 CDS
T05027
Name
(RefSeq) LOW QUALITY PROTEIN: RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110093939
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
90S particles
Other 90S particles
110093939
Pre-60S particles
Other pre-60S particles
110093939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
110093939
NCBI-ProteinID:
XP_028557230
LinkDB
All DBs
Position
Unknown
AA seq
1363 aa
AA seq
DB search
MQANTTNLENCKEVIPNSISHLTIVSSKVVDQNIEAQLNNVSSYVVPLLEDVVINNLMQA
IVTHHSFSQFEVEKIRDVEVRNKTYMAGDVFYEERDMAFTKEHSGMGNESNFLLNTNYNS
DAFTDNEDMNILAKCYARDDNDTSFSKGLVALTDTSMIGLSIKKHNPPFKILFMARNEPL
YALKLPPSLLYSLLRLFRILSEFFVSLELRRGGGLPGRSLKVPGAVVRLDWIEESVPDWV
KTCSLGLDCSRQRHSAPNLAGGIAVRKQSYICLHDVLQNFQGYTILLLASDGITSAILLL
IQLPGKSXKGGREVLYILNALKDCIDLISIKFTNIILKYCKYFLDLRQLSVTRSIMEILQ
TLCSRQASNFSPEFLLELLCSLAHFIPKKEKSADGLASVARLLNLGTKSVFSLNXNMCVV
KLPIIFNSLGEILAGEHEEAIFAATEALKSLIYSCLDENLIKQGIEQINLNHGGGLRKSG
PTIIEKICAIIEGFLDFRYNAVWDVGFKVIXAAFDQLGRHSAELMAGVMRNLADIQSYPA
DEISYKKQFHECLGSALAAMGPEKFLCLLPLNLDAEDVTDWNVWVLPILKQYTVGAELHF
FSQYILDMVSLLKQKSLKLERDGRIFSARNIEGLIYSLWSLFPSFCNYPVDANTSFKEIQ
YILCNTLRQESELHGIICSGLQILIQQNKSASQERFAMSDEELSFPVRKAKEIYTANFAR
ENLNILGSSSKFLSVLSEVFLEAPNDSGGCLQSTIHLFASISDRATVKKIFRKNMIELLK
VTKKVIKLKESKESSSMQVDNLPDEASLTRARALRLELAAMLVSGLDEEEIDLLFSATKP
ALQDEEGLMQKKAYKILSIILKESNGFLSNKLDELLQLIITATASCHFSAKRHRLDCLYY
VIVHISKETPSEQRMREFISAFLTEILLSLKETNKKTRNKAYDLLVEIGHACRDEERGGK
TENLHQLFSMVAGGLISERPHMVSAAIKGLARLAYEFSDLISSAYKLLPSSFLLLQRKNR
EIVKANLGLIKVLVAKSKADGLETHLKGIIEGLLKWRDETKNQFKAKIKSLIEMLVSKCG
VNAVKAVMPEEHLKLLKNIRKIKERKERKGKSQEDINSLYSRTSVSRHSRWNHTRIFSDV
GDEDGGEGSDIENGVARTRTSFHASRASLSSSRMRKLFIKKSLPEDFLDQSDVDPLDLLD
RRTTRSILLSTSKPNRKVEACDDEPEMDNDGRLIVRDDCVKPKQQRNSSDPVSDTRSLTS
SRMSRKSLLSSQRKRQKTESGWSYTGVEYTSKKAGGDLRKKGKLEPYAYWPLDRKLLNRR
VDRKAVARKGMASVMVRKDLKRLEGKSASRALAVTPKRRRGKK
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctaatactactaatcttgagaattgtaaggaagtaattcctaactctatctcc
catttaactattgtttctagtaaagttgttgatcaaaatattgaggctcagctaaataat
gtttcttcttatgtggttcctctcttggaggatgttgtgattaataatttgatgcaagcg
attgttactcatcacagtttctctcaatttgaggttgagaagataagggatgttgaggtt
cgcaataaaacttatatggcaggtgatgttttctatgaggaaagagatatggcatttact
aaggagcactcaggtatgggtaatgagagtaattttcttttgaatactaattacaatagt
gatgcttttactgataatgaggacatgaacattttggctaaatgttatgctagagatgat
aatgatacaagtttttctaagggtcttgttgcattaactgatacttcaatgattggtctt
tcaatcaagaaacacaatccaccattcaagattctattcatggcaagaaatgagcctttg
tatgctcttaagcttccaccttcactcttgtattcattattgcgtttgtttaggattctt
agtgaattttttgtttctcttgagctcaggcgaggcggcgggctgccaggtcgatccctc
aaggtgcctggtgcagtcgtgcggctggattggatcgaggagagcgtgccagattgggtc
aagacgtgtagtctagggctcgactgctcaaggcagcgtcacagcgcgcccaatttggcc
ggcgggattgctgtgagaaaacagtcttatatctgcttacatgatgttttacagaatttt
caaggatatacaatattgttattagcaagtgatgggattacctctgcaatactcctacta
attcagctgccggggaagagtnccaaaggaggtagagaagttctatatattttaaatgct
ttaaaggactgcattgacctgatttcaataaaatttacaaacattattctgaaatactgc
aaatacttcttggatttgcgacaattaagcgtcactaggagtattatggagattttgcag
actttatgttctagacaagcttcaaacttttctcctgagttcttactcgaactattgtgc
tccttggcgcactttatacctaaaaaagagaaatcagctgatggcttggcatctgtagca
cgcctgctaaatttgggaaccaaaagtgtatttagtttaaatnggaatatgtgtgttgtg
aagcttccaataatctttaattcccttggagaaattttggctggtgagcatgaggaagct
atttttgctgcgacagaggcactgaagagtttaatatattcttgccttgatgagaatttg
atcaagcaaggaattgaacagataaacctgaatcatggaggaggattaaggaagtctggt
cccacaatcattgaaaagatatgtgctattatagaaggctttcttgatttcaggtacaat
gcagtgtgggatgtgggttttaaggtcatcnttgctgcatttgatcaactagggagacat
tcagcagagctgatggcgggagtaatgaggaatcttgctgatatacaaagctatcctgct
gatgaaatttcttataaaaagcaatttcatgaatgccttggctcagcacttgctgcgatg
ggccctgagaaatttctatgcttgttgccactcaatctagacgcagaagatgttactgat
tggaatgtgtgggtacttcctattttaaagcaatacacagttggcgctgaattgcatttc
ttttctcagtacattttggatatggtcagccttttaaagcagaaatcactgaagctggag
agagatggacgcattttctcagctcgtaatatagaaggccttatatattccttgtggtcc
ctattcccttccttttgcaactatccagttgatgcaaatactagttttaaagaaattcaa
tacatattgtgcaacacgctccgtcaggaatctgaactgcatgggatcatctgttcgggt
ctccagattctcattcaacaaaataaaagtgcatcccaggaaagatttgcaatgtcagat
gaggagctaagttttcccgtgaggaaagctaaggaaatttacacagcaaattttgcacgg
gaaaacttaaacattttgggatcatcttctaaatttttgtcagttttgtcagaggttttc
ttggaagcgccaaatgatagtggtggatgcttgcagtccactatccatttgttcgcctct
atatcagatagagcaactgtaaaaaaaatcttcagaaaaaatatgatagagctacttaaa
gtaaccaaaaaagttatcaaattaaaggaatctaaggaatcatcttccatgcaagttgac
aatttacccgatgaagcttctttgacacgtgcaagggctcttaggctagaattggctgct
atgcttgtctccggtttggatgaagaagagattgatctgctattcagtgctactaaaccc
gcactccaggatgaagaagggcttatgcagaaaaaagcatataaaattctttcaattatt
cttaaggagtctaatggatttttgtcaaataagttggatgagttgcttcagttgatcatc
acggcaactgcatcttgtcatttttctgcaaaacgccaccgtcttgactgcttatattat
gtaattgttcatatttctaaggaaacaccatcagagcaaaggatgagggaattcattagt
gcatttttaacagaaatactgctttccttgaaagagacaaataaaaaaactagaaataaa
gcatatgatttgttggtcgaaatcggacatgcatgcagggatgaagagcgtggtggtaaa
acagaaaacctgcaccaactttttagtatggttgctggaggtctgattagtgaaagacca
catatggtcagtgctgctatcaaaggtctagctcgcttggcatatgagttttctgatctc
ataagttcggcctacaagttgctcccatcttcctttctcctattacagaggaaaaatcgt
gaaatagtcaaagctaatttaggtttgatcaaagtattggttgcaaaatctaaagctgat
ggtttggaaacacatttgaagggtataattgaaggtttgttgaaatggagagatgagact
aaaaatcaatttaaagcaaagattaaatctcttattgagatgcttgtgagtaaatgtggt
gtaaatgctgttaaggcagtaatgcctgaagaacaccttaaacttctcaaaaacattcgc
aagattaaggagcgaaaagaaaggaaaggtaaatctcaggaagatattaattcgttgtac
tcaagaacaagtgtttccaggcacagtagatggaatcatacccgcatattttctgatgtt
ggagatgaggatggaggggaaggaagtgatattgaaaatggagtagcacgcaccaggacc
tcttttcatgcttccagagcttcattaagttccagccgaatgcgcaagttatttattaag
aagagcttgccagaagactttctagatcagtcagatgttgatccactcgacttattggat
cgaaggacgaccagatcgattcttctgtcgacatcaaagcccaataggaaagtggaagct
tgcgacgacgagccagaaatggataatgatggccgtctcattgttcgcgatgattgtgtc
aaacccaagcagcagagaaattcttcagatcctgtttctgatacaagaagcttaacaagt
agccgcatgtcaagaaaatctttattgagctcccagaggaagcgccagaagacggagtct
ggttggtcttacacaggtgttgaatacaccagcaaaaaagctggtggtgatttgaggaag
aaaggcaagctggagccctatgcgtattggcctcttgatcgcaagcttctcaaccgaaga
gtggatcgaaaagctgtagctcgcaagggcatggccagtgtcatggtgagaaaagatctt
aaaaggcttgaaggaaagagtgcttccagggcactggcagtaactcctaagaggagaagg
ggcaaaaagtaa
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