Dendrobium catenatum: 110094119
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Entry
110094119 CDS
T05027
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110094119
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110094119
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
90S particles
Helicases
110094119
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
WHD_HA2
HA2_C
DEAD
AAA_22
nSTAND3
Rad17
ATPase
AAA_19
Motif
Other DBs
NCBI-GeneID:
110094119
NCBI-ProteinID:
XP_020674929
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
MRTEANPNYLEHLSTEAVEMIQDECKLNGNGSNALILPGKKRNKTKGKDKIFRRNKAMAS
PAISKSKKRKFQKLQEEKEKKFMLSKSIRVLQKYKIRDEAYSILQSSGTIGQEKTQREKC
RLAVHFAKAGLEVPENVALFKKKEKKTYENVVNRPDQGKLTVYSDKELSLMKLVEKDDCV
GLTLKKLVEKENYDGSSLVKSLEKDMNKVLALARPMMTTYGSQQNSLEPHSEFTIKNSMS
VNAESDMLFSSLNCATKVSVSVAHEVMKSSIPTSFTTDNQSDASLRSADRSNICVGKLEA
PKLCGTSDHVNSAVVVHVSRPLEVQEKRRHLPIIMMEQEIMEAINEHPILILCGETGCGK
TTQVPQFLYEAGYGSSNQSGRKGIIGITQPRRVAVLATAKRVSYELGLQLGKGVGFQVRH
DKMIGNGCSIKFMTDGILLREAQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRIIKIR
QELYEEQQKKVLSGAKISPEKLVNRLKLVLMSATLRVEDFVSNKRLFHEAPPVLEVPVRQ
FPVTVHFSRNTPEDYLSQAYKKVLSIHKRLPSGGILVFVTGQREVEYLCKKLRKASQKFS
ENNAKKKIDNERSAGFEVDMKDIDEAFGMEDSFPEQQTDKLWSYEEDDDLEEIDKLLSES
ETDSESVEDSENESFVKSQEQDGNGSVLDFLKNPENLSSLKASFEALAGNIPNPCSEEKL
HLHSTLQTKVSSADPATAIGPLYVLPLYAMLPASAQLRIFEKVPVGERIIVVATNVAETS
LTIPGIKYVVDTGKEKVKNYNYGNGMASFEIRWISKASAAQRAGRAGRIGPGHCYRLYSA
AAFSKDDIFAEFSCPEISKIPVDGVVLLMKFMGIEKVENFPFPTPPKTSALEEAEHCLKA
IEALDEDGKLTSLGRSMAQYPMSPRHSRMILTVINILRKQPGFARANFVLGYAAAAAAAL
SFPNPFLMQLEGTQGTLKTDIDPKLEDNGDASAHDHEEKLSRKKLKAMAKASRTKFCNPN
SDALTIAYALQLFELAENPFEFCRTNSLHFKTMEEMSKLRKQILQLIFHQQKPCHEISWN
QGGFKDVECAWLVHSTKHPLEMNEEELLSQAICAGWADRVAKRIRTISDSMEKEHKVHTM
RYQSSAMDDTIFLHRRSSVSHTAPEYVVYTELIHTNRPYMHGVTAVKSDWLVIYANSTCC
FSAPLTDPKPYYEPLSDCVFCWVNPTFGRHNWQLPLHNLPIKDESFRISVFACSLLEGNV
LPCLKSAKNFLSAPPSSILRPEALGQRRISDLLSRLRIRSGIIHSRAKLKEAWGENSMFL
YPELLNWFQEKFHCQFDKLWEQMLQEAQLESFELFPKRAKKHRKIVRR
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgagaacggaggcaaaccctaactatcttgagcatttatcaactgaggctgttgagatg
atccaagatgagtgcaaattgaatggaaacggaagcaatgcgcttattttacctgggaag
aaaaggaacaaaacaaaaggcaaggacaagatttttaggaggaataaggctatggcttcc
ccagctattagtaaaagcaagaagagaaagtttcaaaagttgcaggaggagaaagagaag
aagttcatgctatctaaaagcataagggtgctgcagaagtataaaataagggatgaagca
tactcaattctgcagtcatcaggcactattggtcaggaaaaaactcagcgtgaaaaatgc
agacttgctgtacatttcgcaaaagcaggtcttgaggtccccgaaaatgtggcacttttc
aagaagaaggaaaagaaaacttatgaaaatgtagtaaatagacctgatcaaggcaaactt
acagtttacagtgacaaagagttgagtttgatgaaactggtggaaaaggatgattgcgtt
ggtttaactcttaagaaattggttgagaaagaaaattatgatggttcatctcttgtgaaa
tccttagagaaagatatgaacaaagttttagctcttgctaggcctatgatgactacttat
ggttcccaacaaaattctctagaaccccattcggagttcactattaagaattcaatgagt
gtgaatgctgaatcagatatgttgttctcatcccttaattgtgcaacaaaggttagcgtt
agcgttgcgcatgaagttatgaagagctccataccaacatcatttacaactgacaatcaa
agtgatgcaagtcttcggagtgcagataggtctaatatatgtgttggaaaacttgaagcc
cctaagctttgtggcaccagtgaccatgtaaattcagccgttgtggtgcatgtatcaaga
ccacttgaagttcaagagaaaaggagacatcttccaatcattatgatggaacaggagata
atggaagcaataaatgagcaccctattctaattttatgtggagaaacaggttgtggtaaa
accacgcaggttcctcagtttttatatgaagctggctatggttcaagcaaccaaagtggc
agaaagggaattattggtattacccagccacgccgtgttgccgttcttgctacagcaaag
agagtttcctacgaactaggtctccagctcgggaagggggttggtttccaagttaggcat
gacaaaatgattggaaatggttgctcaatcaagttcatgactgatggcattttacttcgg
gaagctcagagtgattttctattgaagcgttattctgtcatcattctggatgaggctcat
gagaggagcttgaacacggatatcctcatcggtatgctgtctcggatcatcaaaatacgt
caggagttatatgaggaacagcagaaaaaggtactttcaggtgctaagatcagccctgag
aaattggttaatagactaaagcttgtactgatgagtgctaccctccgtgtcgaggatttt
gtttccaataagagattgtttcatgaagcaccacctgttttggaagttccagttaggcaa
tttccagtcaccgtccacttctcaaggaacacaccagaggactatttatcacaggcttat
aaaaaggttttgtctatccataagaggctcccgtctggtggcattcttgtgttcgtcact
ggacagagggaagtggagtacttgtgcaagaagttgaggaaagcttcacaaaaattttct
gaaaataatgctaaaaagaagattgataatgagagatctgcaggctttgaagtggatatg
aaagatattgatgaggcatttgggatggaagatagttttcctgaacagcaaactgataag
ctttggtcctacgaggaggatgatgacctggaagagattgataagcttttgtcagaatcg
gagacggacagtgaatcagttgaggacagcgaaaatgaaagttttgtcaagagtcaggaa
caggatgggaatggttcagtgctagattttctaaaaaatcctgagaatctttcttcatta
aaagcttcgtttgaggctcttgctggaaatattccaaatccatgctccgaagaaaagcta
catcttcattctactttgcagacaaaagtatcttctgcagatcctgctactgctattggg
ccattgtacgttttacccctttacgcaatgctccctgcttctgcacagcttcgtatattt
gaaaaggttcctgtgggtgaacgaataatagttgttgctaccaatgtagctgagacttcg
ttgacaataccaggcataaaatatgtggttgatacggggaaggagaaggttaagaactat
aattatgggaatgggatggcaagttttgaaattcggtggataagtaaagcatcagctgct
cagcgagctggaagagctgggagaattggacccggccattgttaccgtctatattcagct
gcagccttcagcaaagatgatatatttgctgaattctcctgccccgagatttcaaagatt
ccggttgatggcgtcgtgcttctaatgaagttcatgggaattgaaaaggttgaaaacttt
cccttccctactcctcccaagacctcagcattggaagaagctgagcattgcctgaaggcc
attgaggctcttgatgaggatggcaagcttacatcattgggaaggtcaatggcccaatac
cccatgagcccacgccattcccgaatgattctcaccgtgatcaacattttaagaaagcag
cctggctttgcccgtgcaaattttgtgctgggatatgcagctgctgctgctgcagctcta
agctttccaaatcccttccttatgcagcttgaaggaacccaaggaacattaaaaactgat
attgatccaaaacttgaggacaatggtgatgccagcgctcatgaccatgaagaaaaactg
agtcggaagaagttaaaagcaatggcaaaagcgtctcgtacaaaattttgcaatccaaac
agtgatgccttaactatcgcttatgcactgcagctatttgagcttgcagaaaacccattt
gagttctgtaggaccaactctcttcactttaagaccatggaagagatgtccaagcttagg
aaacaaatacttcagctgatatttcatcagcaaaaaccatgccacgaaatatcatggaat
caaggtggcttcaaggatgttgaatgtgcctggcttgtccattccactaaacacccctta
gagatgaatgaagaagagcttctttctcaagctatctgtgcaggatgggctgatcgagtt
gcaaagagaataaggaccatttcagattctatggagaaggaacacaaagtccatacaatg
aggtaccaatcatccgccatggatgacacgatttttctccaccgtcggtcttctgtttct
cacacagctcccgagtatgttgtctacactgaacttatccacacaaataggccatacatg
catggagtaactgcagtaaaatcagattggcttgtgatatatgctaattctacctgctgc
ttctctgctccactcacggatccaaagccttactatgaacctttaagtgattgtgtcttt
tgctgggtaaatcccacctttggtcggcacaactggcagcttccattacataacttaccc
atcaaagacgaaagttttcggatctcggtgtttgcttgttcccttcttgaagggaatgta
cttccatgccttaaaagtgctaagaatttcttgtctgcacctccatcaagcatactgagg
cctgaagcattgggacagagaaggattagtgatctcttgagcagattaagaatccgttct
ggaataatccatagccgggctaagttgaaagaggcatggggtgagaattctatgtttttg
tatccggagcttctgaattggtttcaggaaaaatttcattgccaatttgacaaattatgg
gaacaaatgctacaagaagctcaacttgaaagctttgagctttttccaaagagagcaaag
aaacataggaaaattgtaagacgatag
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