Dendrobium catenatum: 110094297
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Entry
110094297 CDS
T05027
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
dct
Dendrobium catenatum
Pathway
dct03030
DNA replication
dct03410
Base excision repair
dct03420
Nucleotide excision repair
dct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110094297
03410 Base excision repair
110094297
03420 Nucleotide excision repair
110094297
03430 Mismatch repair
110094297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dct03032
]
110094297
03036 Chromosome and associated proteins [BR:
dct03036
]
110094297
03400 DNA repair and recombination proteins [BR:
dct03400
]
110094297
DNA replication proteins [BR:
dct03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110094297
DNA Replication Termination Factors
ELG1-RFC complex
110094297
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110094297
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110094297
Check point factors
HRAD17(Rad24)-RFC complex
110094297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_16
AAA_assoc_2
AAA_11
DNAX_ATPase_lid
AAA_5
DUF815
AAA_7
ATPase_2
RuvB_N
nSTAND3
AAA_14
bpMoxR
AAA_24
AAA_3
ResIII
AAA_19
AAA_28
AAA_30
AAA_25
MCM
AAA_18
RNA_helicase
ABC_tran
Mg_chelatase
TIP49
FtsK_SpoIIIE
AAA_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
110094297
NCBI-ProteinID:
XP_020675154
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MAEATMEIDVDAPPSRPNKGKSPSASVVNGVKSGPWVEKYRPQSLADVAAHRDIVDTIDR
LTNENKLPHLLLYGPPGTGKTSTILALARKLYGGQYQNMILELNASDDRGIDVVRQQIKD
FAGARSLSFGVKFSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA
LQSRCTRFRFAPLDAAHIKERLQYVVAAEGLDVDESGFAALVRLSNGDMRKALNILQSTQ
MAYQRVTEEAVYLCTGNPMPKDIEQIAYWLLNEPFTASFRYISDIKMRKGLALVDIIREV
TMFVFKIHMSSDIRIKLINDLADIEYRLSFGCNDKLQLGALISTFTNARCALVAAAN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgaccatggagatcgacgtcgatgctccaccgtcgagacccaataagggc
aagtccccctctgcttctgtcgtcaacggtgtcaaatccggtccgtgggtggagaagtat
cgtcctcaatccttggccgatgtcgctgctcaccgtgacattgttgataccatcgatcga
ctgacgaacgagaacaagttgccgcatcttcttctgtacgggccacctgggacggggaag
acgtcaacgatcctggcgctggcgcggaagctctacggggggcaatatcagaatatgatt
ctagagttaaatgcatctgatgataggggaattgatgtcgtgcgccagcaaattaaggat
tttgctggtgcgaggagcctttcctttggtgtaaaattttctgtaaaactggtgctgctg
gatgaagcagatgccatgacgaaggatgcacagtttgcattgcgtagagtgattgaaaaa
cacacgaagagcaccaggtttgcacttatctgcaaccatgtcaataaaatcatcccagca
ttgcagtcaagatgcactcgatttcggtttgctccacttgatgctgcacatattaaagaa
cgacttcaatatgtagtggctgctgaggggcttgacgtcgatgagagtggctttgcagct
ttagtgcgattgagcaatggtgacatgagaaaggctctgaacattttgcagtcaacgcaa
atggcttatcaacgtgtaacagaagaagctgtttacctatgtactggaaatccaatgccc
aaagacatcgagcagattgcctattggctcttgaatgaaccattcacagccagctttaga
tatatatctgatatcaaaatgagaaaagggcttgccttggtagacattattagagaggtt
actatgtttgttttcaagatccatatgtcctcagatattcgaatcaagctcatcaatgac
ttggctgatattgagtacaggttgagctttggatgcaatgacaaactacaactaggggcg
cttatctccactttcacaaatgcacgctgtgcccttgttgctgcagccaactga
DBGET
integrated database retrieval system