KEGG   Dendrobium catenatum: 110094297
Entry
110094297         CDS       T05027                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
dct  Dendrobium catenatum
Pathway
dct03030  DNA replication
dct03410  Base excision repair
dct03420  Nucleotide excision repair
dct03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110094297
   03410 Base excision repair
    110094297
   03420 Nucleotide excision repair
    110094297
   03430 Mismatch repair
    110094297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dct03032]
    110094297
   03036 Chromosome and associated proteins [BR:dct03036]
    110094297
   03400 DNA repair and recombination proteins [BR:dct03400]
    110094297
DNA replication proteins [BR:dct03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110094297
  DNA Replication Termination Factors
   ELG1-RFC complex
    110094297
Chromosome and associated proteins [BR:dct03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110094297
DNA repair and recombination proteins [BR:dct03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110094297
  Check point factors
   HRAD17(Rad24)-RFC complex
    110094297
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_22 AAA_16 AAA_assoc_2 AAA_11 DNAX_ATPase_lid AAA_5 DUF815 AAA_7 ATPase_2 RuvB_N nSTAND3 AAA_14 bpMoxR AAA_24 AAA_3 ResIII AAA_19 AAA_28 AAA_30 AAA_25 MCM AAA_18 RNA_helicase ABC_tran Mg_chelatase TIP49 FtsK_SpoIIIE AAA_2 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 110094297
NCBI-ProteinID: XP_020675154
LinkDB
Position
Unknown
AA seq 357 aa
MAEATMEIDVDAPPSRPNKGKSPSASVVNGVKSGPWVEKYRPQSLADVAAHRDIVDTIDR
LTNENKLPHLLLYGPPGTGKTSTILALARKLYGGQYQNMILELNASDDRGIDVVRQQIKD
FAGARSLSFGVKFSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA
LQSRCTRFRFAPLDAAHIKERLQYVVAAEGLDVDESGFAALVRLSNGDMRKALNILQSTQ
MAYQRVTEEAVYLCTGNPMPKDIEQIAYWLLNEPFTASFRYISDIKMRKGLALVDIIREV
TMFVFKIHMSSDIRIKLINDLADIEYRLSFGCNDKLQLGALISTFTNARCALVAAAN
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggcggaggcgaccatggagatcgacgtcgatgctccaccgtcgagacccaataagggc
aagtccccctctgcttctgtcgtcaacggtgtcaaatccggtccgtgggtggagaagtat
cgtcctcaatccttggccgatgtcgctgctcaccgtgacattgttgataccatcgatcga
ctgacgaacgagaacaagttgccgcatcttcttctgtacgggccacctgggacggggaag
acgtcaacgatcctggcgctggcgcggaagctctacggggggcaatatcagaatatgatt
ctagagttaaatgcatctgatgataggggaattgatgtcgtgcgccagcaaattaaggat
tttgctggtgcgaggagcctttcctttggtgtaaaattttctgtaaaactggtgctgctg
gatgaagcagatgccatgacgaaggatgcacagtttgcattgcgtagagtgattgaaaaa
cacacgaagagcaccaggtttgcacttatctgcaaccatgtcaataaaatcatcccagca
ttgcagtcaagatgcactcgatttcggtttgctccacttgatgctgcacatattaaagaa
cgacttcaatatgtagtggctgctgaggggcttgacgtcgatgagagtggctttgcagct
ttagtgcgattgagcaatggtgacatgagaaaggctctgaacattttgcagtcaacgcaa
atggcttatcaacgtgtaacagaagaagctgtttacctatgtactggaaatccaatgccc
aaagacatcgagcagattgcctattggctcttgaatgaaccattcacagccagctttaga
tatatatctgatatcaaaatgagaaaagggcttgccttggtagacattattagagaggtt
actatgtttgttttcaagatccatatgtcctcagatattcgaatcaagctcatcaatgac
ttggctgatattgagtacaggttgagctttggatgcaatgacaaactacaactaggggcg
cttatctccactttcacaaatgcacgctgtgcccttgttgctgcagccaactga

DBGET integrated database retrieval system