Dendrobium catenatum: 110094821
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Entry
110094821 CDS
T05027
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dct01009
]
110094821
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110094821
Protein phosphatases and associated proteins [BR:
dct01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110094821
Membrane trafficking [BR:
dct04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
110094821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Syndetin_C
DUF7791
EXOC6_Sec15_N
Vps54_N
Motif
Other DBs
NCBI-GeneID:
110094821
NCBI-ProteinID:
XP_020675810
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MEALPSHSGRPPIRTTSSSSGRSSTDLDSPSSFFPPSTAITQSLSSILNNPHASRSDASW
SIFWPSASVGAPDFSAPIATSVSLPDVSRGEFQPYLSAIFESYSRFEDVRKHTSRETGDA
IAESRGHGEALVSCLREVPALFFKEDFALEEGAVFRAACPFSPSIAENAELQERLTHYLD
LVEMHLVREISLRSDSFFEAQVQLQGLNGEIVEACVKVRELKETIRILTGDLVGSAKQVQ
ELNATRGNLVALHQMLTVILYVSHALSALKLLVAAADCAGALDVIDDLHHLLETDELTGL
HCFRHLRDQLAGSLDSINSILSADFVRAAIHDVKAVDSFILSKIKATSSGIMNGLEDEVK
SNDDERLVLRDHLLPLIFGLLRTAKLPAVLRIYRDTLITEMKAAIKSTVAQLLPLLLSRD
PDMVPGERTTDSDSGGLSLASKLRSLSSESFVQLLIAIFKVVQAHLMRAAEVKNVIEFMM
DNLESYDSDSAMAMVTHGSSAVDVATENENQSLSHFLHFLPKNAQRNLLFQAKLNDTSSP
VTSKNFRADVLRENTEAVFAACDSAHGRWAKLLGVRALLHPKLRLQEFLNIYNITQDFIT
ATEKIGGRLGYSIRGTLQSQSKSFVDFQHESRMSKIKAILDQETWVTVDVPEEFQAIVAS
LHFHEESFVNESLQSNHNEQLIVSSNKENRMDSAPNRNADGNSVETGKSASQTLVYGGVS
YHMVNCGLILLKMLSEYVDICKCLPALSSEVIHRVVEFLKMFNTRTCQLVLGAGDMQVSG
LKSITSKHLALASQIISFIYAIMPEIRRVLFLKVPESRKGLLLLEIERVAQDYKVHRDEI
HSKLVQIMRERLLINLRKLPQIVENWNAPEDNDPQPSQFAKAVTKEVTYLHRILSQTLLE
SDVQAIFRQVVQIFHSHLFEEFSKLDISTPQAKNRLYRDVQVILGCIRKLPSDDSNRDQV
PNYGLLDEFLAKKFGEKEVATHSK
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgctgccttcccactcaggaaggcctcctatccgcacaacgagctcatcctcc
ggtagatccagcaccgatttggactctccttcctcgttcttccccccctccactgctatc
acacagagcctttcctctatcctcaacaaccctcacgcgtcccgctccgacgcttcctgg
tctattttttggccctctgcttccgtcggcgcccccgacttctcggcgccgattgccacc
tccgtctcccttccggatgtgtcacgtggcgaattccagccttacctttcagctatattc
gaatcatactcccgctttgaggatgttcgcaaacacaccagtagagagacgggtgatgcc
attgctgagtcacgcggtcacggggaggctctcgtttcctgtcttcgggaagtgccggcg
ctcttctttaaggaggactttgctcttgaagagggtgcagtgttccgcgcagcctgccct
ttttcgccttccatagccgagaacgccgaactgcaggagaggcttacccactatttggat
ttggtggagatgcatttggtaagggagatttcgctacgatcagactcgttctttgaggcc
caggtgcagctgcagggattaaatggagagattgtggaggcgtgtgtgaaggtcagggaa
ctgaaggagacgattaggatcctgactggtgatcttgtgggatcagcgaagcaggtgcaa
gagctcaatgctacgagggggaaccttgtggcgctgcatcagatgctcacggtgatattg
tacgttagccatgctctttcagctttgaagctgcttgtggctgctgccgattgtgctggt
gctctagatgtcattgatgacttgcatcatttattggagacagatgagcttactggactt
cattgtttccgacatttaagggatcaattggcaggatcgttggattccataaatagcatt
ctttcagcagattttgttcgagcagcaatacatgatgtcaaagctgtagattcttttata
ttgtcaaaaataaaagcaacttcatctggcatcatgaatggtttagaagacgaggtaaaa
agtaatgatgatgaacgcttggttctccgtgatcatcttcttcctctaatttttggacta
cttcgaacagccaagcttcccgctgttttgaggatctaccgagacactcttattactgaa
atgaaggctgcaatcaaaagtactgttgcacagctgcttcctcttttgttatctcgggat
cctgatatggtacctggtgaacgaacaacggactcagatagtggaggtttatctcttgct
agcaaacttagaagcctttcatctgaaagctttgttcaacttttaattgctattttcaag
gttgtccaggcacatttaatgcgagctgcagaagttaaaaatgttatcgagtttatgatg
gacaatcttgaaagttatgatagtgattctgcgatggcaatggtcacccatggttcatcc
gctgttgatgttgccactgaaaatgagaatcagtctctttcacattttctgcattttctt
ccaaagaatgcacaaagaaatctcttgttccaagcaaaactaaatgatacatccagccct
gtcacctcaaagaactttcgtgctgatgtattacgggaaaacacagaagctgtgtttgct
gcttgtgattctgctcatggaaggtgggctaaacttcttggtgtccgtgctcttcttcac
ccaaagttaaggcttcaagagtttctaaacatctataacataactcaggactttatcaca
gctactgagaagattggcgggagactaggctacagcattcgaggaacgctgcaatcacaa
tcaaaatcatttgttgattttcaacatgaatcccgaatgtcaaagattaaagcaattctt
gatcaagaaacatgggtgactgttgatgttcctgaggaatttcaggcaattgttgcatct
cttcattttcatgaggagtcatttgttaatgagtctcttcaaagcaatcataatgagcag
ctaattgtcagttctaacaaagaaaacagaatggattctgcaccaaatcgaaatgctgat
ggtaactctgttgaaactggaaaatctgcatctcagactcttgtgtatggaggtgttagt
tatcacatggtgaactgtggtttaatactattgaagatgctgtcagagtatgttgatatt
tgtaaatgcctgccagctttatcatctgaagtcatccaccgtgtggtagaatttttgaaa
atgttcaacaccagaacttgccagcttgttcttggtgctggtgatatgcaggtgtctggc
ttgaagtctataacatcgaagcacttagctctggcaagccaaattatcagttttatttat
gctatcatgccagaaatccggagagttctctttctgaaagtacctgagagccgtaaaggg
ttgttgcttttagagattgaaagagtggcccaggactacaaagttcatcgtgatgagatt
cattcaaaattggttcagataatgcgggaaagattattgataaatcttaggaagctgcca
caaattgttgagaactggaatgctccagaggataatgatccacaacccagtcagtttgct
aaagcagtcaccaaggaagtgacttaccttcatcgtatcctttctcaaacattacttgag
agtgatgtccaagcaattttcaggcaagttgttcaaatttttcattctcacctgtttgaa
gaattctccaagttagatatcagcacacctcaagccaagaatcgactttaccgtgatgtt
caggttatactcggatgcatacggaagttgccctctgatgattcaaacagagatcaggtg
ccaaactatggtctgcttgatgaattcctggcaaagaaatttggagagaaggaagttgct
acccattcaaagtag
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