Dendrobium catenatum: 110094823
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Entry
110094823 CDS
T05027
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dct
Dendrobium catenatum
Pathway
dct04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110094823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110094823
03009 Ribosome biogenesis [BR:
dct03009
]
110094823
04131 Membrane trafficking [BR:
dct04131
]
110094823
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dct04147
]
110094823
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110094823
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110094823
Membrane trafficking [BR:
dct04131
]
SNARE
SNARE associated proteins
Others
110094823
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110094823
Exosome [BR:
dct04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110094823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
Vps4_C
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NACHT
DUF815
AAA_24
NB-ARC
TsaE
AAA_lid_PRS2_C
Sigma54_activat
Zeta_toxin
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
110094823
NCBI-ProteinID:
XP_020675811
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MASKDEASSSDPKLGKRDFSTAILERKKAPNRLVVDEAINDDNSVVSIHPNTMEKLQLFR
GDTILLKGKKRKDTICIALADDSCEEPKIRMNKVVRSNLRVRLGDVVSVHQCQDVKYGKR
VHILPIDDSIEGVTGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKIIETDPAEY
CVVAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG
VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAE
KNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSID
PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAAL
CTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFKTALGTSNPSALRETVVEVPNV
SWEDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE
CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAG
GAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDDASRY
QIFKACLRKSPISKDVDLAALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRRS
ENPEAMEEDEGDEVSEIKASHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
SERSEGGAAAGSGGADPFAASAAADDDDLYN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaaggacgaggcatcgtcttcggatccaaagttgggaaagagggatttcagt
acggcgattttggagaggaagaaggccccgaatcgactggttgttgacgaggctatcaat
gacgataattccgtggtctcgatacaccccaatacgatggaaaaactccagcttttcaga
ggggatacaatcctcttgaagggaaagaaaaggaaagatacaatctgtattgctcttgct
gatgattcatgtgaggaaccaaagattaggatgaacaaggttgtgagatcaaatctaaga
gtaagacttggtgatgttgtttcagttcaccagtgccaggatgtcaaatatggaaagcgt
gtacatatacttccaattgatgattccattgaaggtgttacagggaacatatttgatgca
tatttgaagccatattttctagaggcctatcgacctgtaaggaaaggagatctctttctt
gtcagaggtggcatgagaagtgtggagtttaaaatcatagaaactgacccagctgagtat
tgtgttgtggctccagacactgaaatcttctgtgaaggggagcctgtaaaaagggaagat
gaagacagacttgatgaagtgggctatgatgatgtgggtggagttagaaaacagatggct
caaattagagaattggtagagcttcccctgagacatcctcagttgttcaaatcaattggt
gttaaaccacctaaggggatcttactctatggacctccaggttctggcaagacattgata
gccagagctgttgcgaatgagactggagcctttttcttttgcattaatggtcctgagata
atgtcaaagttagctggagaaagtgagagcaatctcaggaaggcttttgaggaagcggag
aagaatgcaccatctattatttttattgatgaaattgattcaattgctccaaaacgtgaa
aaaactcacggcgaagttgagaggcgaattgtttcacagcttctcacattgatggatgga
ctcaaatcccgtgcacatgtaattgtcattggagctacaaatcggccaaacagcattgac
ccagctcttcgaaggtttgggaggtttgaccgggaaattgacattggagtgccagatgaa
gttggtcggcttgaagtccttcgcattcacactaagaatatgaaactttctgatgatgtt
gatctggagagaattgctaaagatacacatggctatgttggggctgaccttgctgcactc
tgtactgaagctgctctccaatgcattagggagaaaatggatgttattgatttggaagat
gaaaccattgatgctgaggtgcttaactcaatggctgttacaaacgaacatttcaagaca
gctctgggaactagcaatccttctgcacttcgcgagacggttgttgaagttcccaatgtc
agttgggaagatattggtggacttgataatgttaagagggaacttcaagagaccgtccaa
tatccagttgaacatccagagaagtttgaaaagtttggaatgtctccttccaaaggggtg
ctcttctacggtcctcctggctgtggaaagactctgcttgctaaggccattgccaatgaa
tgtcaagccaactttatcagtgtaaagggtcctgagctgctcaccatgtggtttggtgag
agtgaggcaaatgtgcgcgaaatttttgataaggctcggcagtctgcaccatgtgttctg
ttctttgatgagctcgactcaattgctactcagagagggagcagtgttggtgatgccggc
ggagctgccgatcgagtactcaatcaacttttgacggagatggacggaatgtctgcgaag
aaaacagtcttcatcatcggagctactaataggcctgacatcattgaccctgcattgctt
aggccgggccgtcttgaccaattgatttacattcctctaccagatgacgcttctagatac
cagatttttaaagcttgtctgaggaaatcccctatctcaaaagatgttgacttggcagct
cttgcgaagtatacccaaggctttagtggtgcagatattacagaaatttgccagcgggct
tgcaagtacgcgatcagagaaaatattgagaaggacattgaaaaagaaaggcgtcgcagt
gaaaacccagaagccatggaggaagacgaaggagatgaagtttctgaaatcaaagcttcc
cactttgaagaatccatgaaatacgctcggcgaagtgtaagcgatgcggacattcggaag
tatcaggcgttcgctcaaactctgcagcagtcgagaggttttggaagtgaattccgcttt
tcagaacgctcagagggaggagctgcagctggctctggaggtgctgacccatttgctgcc
tctgcagctgctgatgacgacgacctgtataattaa
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