Dendrobium catenatum: 110094874
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Entry
110094874 CDS
T05027
Name
(RefSeq) uncharacterized protein LOC110094874 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110094874
Membrane trafficking [BR:
dct04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110094874
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
110094874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RSE1_2nd
WDR55
Beta-prop_WDR5
Synaptobrevin
WD40
Beta-prop_Aladin
CCDC106
Beta-prop_IFT122_2nd
KNTC1_N
Cas_CXXC_CXXC
Motif
Other DBs
NCBI-GeneID:
110094874
NCBI-ProteinID:
XP_028554111
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MFVKHLLEKAMGQNSQHGNITSSSHDFQVAMHYGIPYTASILAFDAVQRLLAIGTLDGRI
KIIGGDNIEGLLISPKKLPYKYLEFLDNKGFIMGVSNENDIQVWDLQCRKLSYSLQWESN
ITAFAVISGTYLMYVGDEKGLLSVLQYDADEGKLFSMPYSIPPKPLSESVGVSIPDQQQI
VGILPQPGTSGTRVLIAYENGLIILWDICESCAISVRSSRDLQLKGKEHSEPLSVASNDL
PDSVVDEQEEKEICSICWVSNSGSILAVGYIDGDILLWDLSVSSSVKGKESTVSSKNVVK
LQLASGDRRLPVIVLHWSANAKANNDKCGQLFIYGGDDMGSEEVITVLNLEWTTGIDTVR
CTSDAELNLNGSFADMILVPNAGPANLNSTAALFILTNPGEINVYDDAALSLLKSTEGDA
RAWAGKFPVVVPTIDPLITVAKLFSLPMDQNSSKALLKKAFAKGNIKPTLLNGTKWPLTG
GVPSESTVSEDNGIDRLYIAGYQDGSVRIWDATHPILAQMLVLDDKVANIKADDQSRSVS
ALDFCFLNMSLAVGNEFGLVRVYKLQGGTNHSNIIFVNGNKHDVHPVRQGEGFHCTAVFT
LSSPIRTLQFANCGDKLAVGFESGKVAMLDLTSYATLFQTDCLSSTSSQVISIAMELNPL
VNTMISSPKHPRPEDLKESSELLMFILTKNGHVIVVDSISGNTLNSMSKPTKKESAAISM
YVIDSTTVSEILDERQQVLDDYLSKSDSKNYDSSNNRKQGIEQHSSDASNSSDLLLDPLL
LLCYENSLRLYSVKSVLQGESHSCRKIKLAKHCCWSTIFRKRNEKSCGLILLYQTGDLEI
RSLPNLEIVSGSSLMSILRWSFKTNMEKTMSSYDNGQISMVNGCEVAFVSLLACENDFRI
SESLPCLHDKVLAAAADSALTHYASQKNKQDSSPRILIGLIKGLKGSRAESNADTSDHTV
KPGFCKIEDYFLKDPFLEPSLVATDHQEIELSIDDIEIDDSLPVASSSSSVSSSSDPKKQ
KKKDENKDREKLFDGAKNDAKPRVRTPQEILTKYKFGGDAAAAAAHAKDKLAERQEKLER
LKKNTEELQSGAENFASLANELVKTMENKKWWKL
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcaagcacctgttggagaaagccatggggcagaattcacaacatggaaatatt
acatcaagcagccatgattttcaagttgctatgcattatggtatcccttatactgcatct
attcttgcttttgatgctgttcagcgactcctagcaattggaacattggatggtagaata
aagataattggtggtgataatattgaaggccttctcatatcaccgaagaagttgccctac
aaatatttagagttcctcgacaacaaaggttttattatgggtgtttcaaatgagaatgac
attcaggtttgggatctccaatgcaggaaattatcttattctttgcagtgggaatccaac
attactgcctttgctgttattagtggaacttatttgatgtatgttggagatgagaaggga
cttctttcagtactacagtatgatgcagatgaaggaaagctgttcagcatgccttatagt
attccaccaaagcctctttctgaatcagttggtgtttcaattcccgatcaacaacagata
gtgggaattttgccgcagcctggtacctctggcaccagggtgctgattgcatatgagaat
gggctgattatactctgggacatatgtgaaagctgtgccatttcagtgagaagttctagg
gatctgcagctgaagggtaaggaacatagtgagcctctctctgttgcttcgaatgacctt
cctgattctgtagttgatgaacaagaggagaaagagatttgctccatttgctgggtgtct
aactcgggctccatccttgccgtgggatatattgatggggatatattattatgggatctt
tcagtaagttcctcggtcaaagggaaagaaagcactgtatcatctaaaaatgttgtcaag
ttacagctggcttctggagatcgcaggctccctgtcattgttttgcactggtctgctaat
gccaaagcaaataatgataagtgcggacagctttttatctatggtggcgatgatatgggg
tctgaagaagttataacggttctgaatcttgaatggaccactggcatagataccgtaaga
tgcacatcggatgcagagctaaatcttaacggatcctttgcagatatgattttagtgcct
aatgctggacctgcaaatcttaactctactgctgcacttttcatattaactaaccctggt
gaaataaatgtctatgatgatgctgctctttccttgctgaaatctacagagggtgatgct
cgtgcttgggcaggaaagtttcctgttgtagtaccaactatcgatccactcattactgtt
gcaaagctattttcactaccaatggaccagaactcttctaaggctttattaaagaaagcc
tttgctaagggaaatataaaaccaactttgttgaatggtacaaagtggcctttgactggt
ggagtcccaagtgaatcaaccgtttctgaagacaatggcattgatagactatatatagca
ggttatcaagatggatctgttagaatatgggatgctacacatcccattctagcacaaatg
ctagttttagatgataaggtcgcaaatattaaagcggatgaccaaagcagatcggtatca
gcattggacttctgtttcttaaatatgagtttagctgtcgggaatgagtttggtcttgtt
cgagtctataagctgcaaggaggcactaatcattcaaatattatctttgtgaatggcaat
aaacatgatgttcaccctgtgcgccaaggagaaggatttcattgtactgctgtgttcact
ctaagttcacccattcgaactctgcaatttgcaaattgtggtgacaaattagctgttgga
tttgaaagtggcaaggttgcaatgctggatctgacttcttatgcaactttattccaaaca
gattgtttatctagcacaagttctcaggtcatatctattgcaatggaattgaatccactc
gtcaacaccatgataagcagtccaaagcatccaagacctgaagatcttaaagaatcttca
gagttgctaatgtttattttaacaaagaatggtcatgttattgttgttgacagcattagc
ggcaatacattaaattcgatgtcaaagcccacaaaaaaggagtctgcagcaatttccatg
tatgttatagatagtacgactgtctctgaaatacttgatgagaggcaacaagttttagat
gattatttatccaaaagtgattcaaaaaattatgattccagcaataacagaaaacaagga
attgagcagcattccagcgatgcttcaaactcttcagatcttttattggatccgcttctt
ttactctgttatgaaaattcactacgattgtattccgtgaaatctgtgctacagggagag
agccactcctgtcgcaaaataaaactggcaaaacattgttgctggtcaacaatttttagg
aaaaggaatgagaagtcttgtggcctaattttactttaccagaccggggatcttgagatt
agatctttgccaaatcttgaaattgtttctggaagctccttgatgtcaattttgcggtgg
agcttcaagacaaacatggagaagacaatgagctcatatgataatgggcagattagtatg
gtgaatggttgtgaagttgcttttgtctcccttttggcctgcgaaaatgacttcagaatt
tcagaatctctgccttgccttcacgacaaagttctagctgcagctgctgatagtgcttta
acacattatgctagtcagaaaaacaaacaggattcatctccgaggattcttattggtttg
atcaaaggactaaaagggagtagagcagagagcaatgcagacacttctgatcataccgtt
aagcccggtttttgtaaaatagaggattattttttaaaagatccctttttagaaccgtca
cttgttgcaactgatcaccaagaaattgaactaagcattgatgatattgagattgatgac
agcctaccagtagcatctagttcatctagtgtttccagttcatccgatccaaagaaacaa
aagaaaaaagatgagaataaggatagagagaagttatttgatggagcaaaaaatgatgcg
aagcctagagtaagaactcctcaagaaatcttgaccaaatataaatttggcggggatgct
gctgctgcagcagctcatgcaaaagataaactggcagaaagacaggaaaaactagagagg
cttaagaaaaatactgaagagttgcaaagtggagctgaaaatttcgcttcattagctaat
gaacttgtgaagactatggagaacaagaaatggtggaaactatga
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