Dendrobium catenatum: 110095140
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Entry
110095140 CDS
T05027
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
dct
Dendrobium catenatum
Pathway
dct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110095140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110095140
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110095140
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110095140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110095140
NCBI-ProteinID:
XP_028550830
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MSVAPRNDNVQIREVWDDNLIQEFALIREIVDDFPFVAMDTEFPGVVCRPVGNFKSSFDY
QYAMLKANVDMLKLIQLGLTFADERGNLPTCNTGYGCVWQFNFREFDDERDICASDSIEL
LRQCGINFKKNREHGVDALRFGELFMSSGIVLNEDVHWIAFHGSYDFGYLLKLLTCKELP
DTREGFFQLMKIYFPTLYDIKHLIKFCNNLYGGLSKIAEMVGVQRVGISHQAGSDSLVTS
CTFRKLSDSYFPNGLTEKQAGVLNGLGVDNAQKPVTK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtggccccaaggaacgataacgttcaaatacgagaggtttgggatgacaatctg
atacaagaatttgctcttatccgcgagattgtggacgacttccccttcgtcgccatggac
acggagttcccgggggtcgtttgccggccggtaggaaacttcaagtcgtcattcgactat
caatatgcgatgctaaaggctaacgtcgatatgttgaagctgatccagctcggcctcacg
ttcgccgacgagcgcggaaacctccccacctgcaataccggctacggctgcgtctggcag
ttcaatttccgggagttcgacgacgagcgcgacatttgcgcttccgattccattgagctc
ctccgccagtgtggaatcaacttcaagaagaacagagagcacggcgtcgacgcccttcgt
ttcggtgagctcttcatgtcctccggcattgttctcaacgaggatgtgcattggatcgcc
ttccacggcagctatgacttcggctacctcctaaagctactaacttgcaaagagcttcct
gatacccgggaaggcttttttcagctcatgaagatctacttcccgactctgtatgacatt
aaacatcttataaagttctgcaacaatctttatggggggctcagtaagattgcggagatg
gttggtgtgcagagagttgggatcagccatcaggcgggctctgacagcctcgtcacctcc
tgcaccttcaggaagctcagtgactcttactttccaaatggcttaactgagaagcaggct
ggtgtgttgaatggccttggtgtagataatgcacagaaacctgttactaaataa
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