Dendrobium catenatum: 110095170
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Entry
110095170 CDS
T05027
Name
(RefSeq) tRNase Z TRZ3, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dct03016
]
110095170
Enzymes [BR:
dct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
110095170
Transfer RNA biogenesis [BR:
dct03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
110095170
Prokaryotic type
110095170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
110095170
NCBI-ProteinID:
XP_020676249
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MSQISNLRLLCSYSSFLCPNPLFRFSFSSSLLSKPRVLLNSHFSTLTVLSYSGRRARRPA
SGGGYFHHRRGNSTLREERSKDRDSPPVREMEEGLVGFNKKRAEGRDKSDRPRTLQLKSR
KLNPVNTICYVQILGTGMDTQDTSPSVFLFFDKQRFIFNAGEGLQRFCTEHKIKLSKVDH
IFLTRVSSETAGGLPGLLLTLAGIGEEGMSVNIWGPSDLKYLVDAMRSFIPNAAMVHTRS
FGEMQTANEVAVLDYSIHCCVDPIILIDDEVVRLSAIPLRPNCSGDSSMKPGDVAVVYTC
ELPEIKGKFDPEKAASLGLKPGPKYRELQLGNSVMSDHFNIMVHSSDVLGPSIPGPVVLL
VDCPTPSHMKELFSTQSLNSYYVDSPDCQRDGIKLVNCVIHLGPASVTKKADYQIWMKRF
GKAQHIMAGHEMKNMKIPILKSSARISARLNYLCPQLFPASGVWPPKDGIASSFRDSIIP
CEVHPSDLVDSVSAENLLKFHLRPYSQLGLDRSAIPELLNQTQIFNELLSEIPEIKDVSK
CISSFWRNHVENKGPRPLTCGEVVEEPWIKEASQLFDDNLRNQRKNTSKIGVPCLNFNQK
PELDDVSDIPPCLDNITREDMEIVLLGTGSAQPSKYRNVSSIFINLFSKGCLLLDCGEGT
LAQLKRRFGVDGADNAMKTLKCIWISHIHADHHTGLARILALRCQLLRDSPHEPLLVIGP
RSLKRFLDAYSRLEDLDMLFLDCRHTTEASMDAVLSSHGLGEDCFAEVEEEENRAKGSEP
QLVETTLFGQGSKMQSYWKRPGSPVDMATVMPVLRRLKELLHKAGLEALYSVPVIHCPQA
FAVVLKAAERTNSMGKVIPGWKLVYSGDTRPCQSLVDASHNATVLIHEATFEDGLGEEAL
ARNHSTTMEAIQVGSKAGAYRIILTHFSQRYPKIPVFDEAHMHNTCIAFDLMSVNIADLH
LLPKVLPYLKVLFRNEMVVDESDDAMDLTVDQY
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaatctccaacctgagactcctctgctcttattcctcttttctttgcccaaat
cccttatttagattctccttttcttcgtccctcctctccaagcctagggttttactgaat
tctcacttctctacgctcacagtgctctcgtattccggtcgaagagcaagaaggccagcc
agcggtggcgggtattttcatcacaggaggggaaacagtacgctgagagaggagaggagc
aaggacagagactcccctccggtgcgtgaaatggaggaagggttggtgggattcaacaaa
aaacgggcggaagggagggataagagtgacaggcctaggactctccagctcaagagtcga
aaacttaaccctgtaaacaccatttgttatgtacagattttgggcacaggaatggacacg
caggacacctcaccgtccgtgtttttattttttgacaagcagaggtttatatttaatgct
ggggagggattgcaacgtttctgcacagagcacaaaatcaagttatcaaaggttgaccat
atattcttgactcgagtgtcatcagaaaccgcaggaggtcttccaggtcttctgcttact
ctagctgggataggcgaggaaggaatgtcagttaatatatggggtccttctgaccttaaa
tatcttgttgatgccatgcgttcatttattccaaatgctgccatggtgcacacacgcagt
tttggggaaatgcaaaccgctaatgaagttgcagttttggattattcaatacattgttgt
gttgatccgattattcttatagatgatgaggttgtccgtttatcagcaattcccttgagg
ccaaactgttctggagactcctctatgaaacctggtgatgttgcggtggtctacacttgc
gaattacctgagattaagggaaaatttgatccagaaaaagctgcatcccttgggttgaaa
cctggaccaaaatatcgagaattacagcttgggaactcggttatgtcagaccattttaac
attatggttcattctagcgatgttttaggtccttcaattcctggtccagtagtccttctt
gtagactgtcctacgccatcacatatgaaggaattgttctctacacaatctctcaattct
tactatgtagattcaccggattgtcaaagagatggcattaaattagtgaattgtgtaatt
caccttggaccagcttctgtaacaaagaaagctgattatcaaatatggatgaagaggttt
ggaaaagcacaacacatcatggcagggcatgagatgaaaaatatgaaaattcctatcctt
aaatcaagtgcaagaatttcagcaaggctcaactacctctgtccacaactattcccagct
tcaggagtttggcctcctaaggatggaatcgcgtcttcttttagagactctattattcca
tgtgaggttcacccttcagatttggttgacagtgtctcagctgaaaatctacttaagttt
cacttgcgtccctactctcagcttggattggacagatctgctattccggaactgctaaat
cagacacaaattttcaatgaactactttctgaaatccctgaaataaaagacgtttctaaa
tgtataagttcgttctggaggaatcatgttgagaataaaggtccgagacccttaacgtgt
ggtgaggtggtggaggaaccatggataaaagaagcttctcaactttttgatgataacttg
agaaatcaaaggaaaaatacatctaaaataggagttccttgtctaaatttcaatcaaaaa
cctgaacttgatgatgtctctgatattcccccttgcttggacaatataacgagagaagac
atggaaattgttctgttgggtacaggctcagcacaaccctcaaagtatcgcaatgtcagt
tctatctttatcaatcttttctctaaagggtgtctacttctcgattgtggtgaaggtact
ttggcacagttgaaaagaaggtttggagttgacggtgctgataatgccatgaaaacttta
aaatgtatttggatttctcatattcatgctgatcatcatactggtcttgctcgaatactc
gcgctgcgatgccagcttctgagggattcgcctcatgagcctttgcttgtaattggacca
aggtcactgaagagatttttagatgcttattctagacttgaagatctggatatgctattc
ttggactgcagacacacaacagaagcttccatggatgctgttctcagttcccatggtttg
ggtgaagattgctttgccgaagttgaagaagaagagaacagagcaaaaggatcagagcct
caacttgtggagactaccttatttggccaaggcagtaaaatgcaaagctattggaagagg
cctggaagtccagttgacatggccacagttatgccagttttgaggagattgaaggagttg
cttcataaagcaggtttagaggctttgtacagtgtccctgttatacactgtccacaggca
tttgctgttgttttgaaagcagccgagaggacaaatagtatgggaaaagtcataccaggt
tggaaactggtctattccggtgatacaagaccatgccaatcactcgttgatgcttctcac
aatgcaactgttctcatacacgaggcaacttttgaggatggcctaggggaagaagcattg
gcaagaaaccatagcacaacaatggaagctatacaagtaggatccaaagcaggggcttat
cgcataatcctaactcatttcagccaaagatatcccaaaatcccagtctttgatgaggct
cacatgcacaatacatgcattgctttcgacctgatgagtgtcaacatagcagatcttcat
ctgcttccaaaggttctcccttacttaaaagttctattcagaaatgaaatggttgttgat
gaatctgatgatgccatggatttgacagtggaccaatattag
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