Dendrobium catenatum: 110095546
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Entry
110095546 CDS
T05027
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
dct
Dendrobium catenatum
Pathway
dct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110095546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dct03400
]
110095546
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110095546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_14
ERCC3_RAD25_C
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
110095546
NCBI-ProteinID:
XP_028555588
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MLNCHVTLLRSSATSFPITREDLDSESIGGIFLGSDKASDQVCKHDFKLDEQVGIICQFC
NFVHTDIRDVMPPFMTADGRISNKEYWGKKGFLEMSAYILKLSTFDNSMSHSNFASFGGN
DTIWALIPDLKLKLYDHQKKAFEFIWRNISGSLNPKDMEVQLGSTGGCIISHTPGSGKTF
LMISFIVSYLTLFPKSRPLVLVPKIAICVWRKEFEKWGVQFPLHIMHPVNSYRKETLDCK
TRTPFMDQRKPNMKISHVMDCLTKLHKWHEEPSILLMSYSSFSSMQKDSKLEHKKFMARV
LQESPGLLILDEGHNPRSTNSKLRNLIMEVKTKSRVLLSGTLFQNNFEEYFNTLCLARPT
FVDDVLWELDPEISTLMSSRSKISHKRSRRKEKLARKIFVQRVGEKISSSMEDERKHGFD
VLNNITSGFIDIYDNDNSNKLPRLQIYTLVLMPTDIQNEILSRLQTRLKQLAGHPIGLEL
LISVGSIHPCLINTMTHANEFYSDSELKNIDKHKENMMCGSKMKFVFDLVHKSSIRGEKV
LIFSHNISPISLLVKFFENLLGWHKGDEVLVLQGDQELSLRAKIMEKFNGDVENKCKLLI
ASTSACAEGISLTAASRVVLLDSEWNHSKTRQAIARAFRPGQERDVYVYKLLASGTWEED
KYRSNEWKAWLSKMIYIGQYIDHNSCRKVDVVEDALLRELVEEDQGNMFKMIMKQD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgctcaattgccatgtcactttactgagatcttccgccacaagttttcctattacacgt
gaggatctggactcagaatccattggtgggatatttttgggttcagataaagctagtgat
caagtgtgcaagcatgattttaagctggatgagcaggttggaattatttgtcagttttgc
aattttgttcacactgatatacgagatgtcatgccgccattcatgactgctgatggacga
atttcaaataaggagtattggggtaaaaaaggtttccttgagatgagtgcttacattcta
aaattaagtacttttgacaattccatgtcacactctaacttcgcatcatttggaggaaat
gatactatttgggctttaatacctgatctcaaattaaaattgtatgatcaccagaaaaag
gcttttgaatttatatggaggaatatttctggatctttgaatcctaaagacatggaggtt
cagttagggagcacaggtggttgcattatatcacacacacctgggtctggtaaaacattt
ctcatgatttcatttatagtaagttatttgacactttttcctaagagcagacctctggta
ctcgtccctaagattgcaatttgtgtttggcgcaaagagtttgagaagtggggtgttcag
tttccattgcacataatgcacccagttaacagctacagaaaagaaactctggattgcaaa
acaaggacaccttttatggaccaacgaaagcctaacatgaaaataagtcatgttatggac
tgcctaacgaagttacataaatggcatgaagaaccaagcattctcttgatgagttactcg
tccttttcctcaatgcagaaggattcaaaacttgaacacaaaaagttcatggcgagggtg
ctgcaggaaagtccaggtctcctgattttagatgagggtcacaatccacgaagcaccaat
tcaaagctgaggaacctcataatggaagtgaagaccaagtcaagggtacttttatctggc
acactctttcaaaataactttgaagaatatttcaacacactttgtttggctaggccaacc
tttgttgatgatgtcctctgggaattggatccagagatttcaacattgatgagttctcgg
agcaaaatatctcataaaagaagcagaaggaaagagaaattagctagaaaaatatttgtt
cagagagttggtgaaaaaatatcatctagcatggaggatgaaaggaagcatggttttgat
gttctgaacaatatcacaagcggtttcattgatatttatgataatgacaattcaaataag
cttccacgtctacaaatatacactctggtactgatgccaacagatatacagaatgaaatt
ttatctagattgcagacccgcctaaaacagttagcaggacatccaattggacttgagttg
ctcatctctgttggttccatccacccctgtttgataaacaccatgacccatgcaaatgaa
ttttatagtgacagtgagctgaagaacatcgacaaacacaaggaaaatatgatgtgcggt
tctaagatgaaatttgtgtttgatcttgtacacaaatcctccatcagaggggagaaggtt
ctgatcttttcccataatatatcccctattagtttacttgtaaaattttttgagaatttg
ctgggatggcataaaggggatgaagtcttagtgcttcaaggtgatcaagaactttccctg
agagcaaaaatcatggaaaagttcaatggagatgtggaaaataaatgcaagctgttaatt
gcatctacgtcagcatgtgctgaaggtattagcttgactgcagcatctcgagtggttttg
ttagactcagaatggaaccattctaaaacaagacaagctattgcacgagcttttcgacct
ggtcaggagagagatgtttatgtttacaagttattggcatcaggaacatgggaggaggat
aaataccgcagtaatgaatggaaagcttggttgtcaaaaatgatttatattggacaatac
atcgatcataattcatgcaggaaagttgatgttgttgaagatgcattattgagagaactc
gtggaagaagaccagggaaatatgttcaagatgataatgaagcaggattaa
DBGET
integrated database retrieval system
