Dendrobium catenatum: 110095574
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Entry
110095574 CDS
T05027
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
dct
Dendrobium catenatum
Pathway
dct00040
Pentose and glucuronate interconversions
dct01100
Metabolic pathways
Module
dct_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110095574
Enzymes [BR:
dct01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110095574
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110095574
NCBI-ProteinID:
XP_020676831
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All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MEPKFILLLLLHFSTVAKSAYNVVDFGAKPDGRTDSTKAFLAAWAEACGDKIPATMVVPS
GPFLVGRALFQGPCKNDKIGLFIKGTILGKTGYSTASEWITFKYVKGLSIYGGTFNARGQ
SLWACKAAGRNCPNGSTALTISQAKNVLLSKVKVQNSQNFQIAIIFSQEIKVEGATITAP
GNSPNTDGIHIHMSSFITITGSTMATGDDCVSLGEGVSNAWIENIKCGPGHGISIGSLGD
GTETTMVQNVTVSSVVFTGTQNGFRVKTWATPSSKGFVRGVTFEHGTMKNVGNPIMIDQN
YCPVPGNCPNESSGIKISKVTFSDVHGTSSTQVAVNLDCSKSNPCQGIQLTNIKLSYKRK
NHELAKSFCRNVKGKNSGFVVPPSCL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaaattcattctccttctcctcctgcatttttccactgtcgcaaagtcggcc
tacaatgtagtggacttcggcgcaaagcccgatgggaggactgactctaccaaggccttc
ttagctgcatgggccgaggcctgtggtgacaaaattccggccacaatggtggtacctagc
gggccttttttagtaggccgggctttgtttcaaggtccgtgtaaaaatgacaagattggg
cttttcataaagggcactatactgggcaaaactggctattccaccgcgtcggagtggatc
acgtttaaatatgtgaaggggctttccatttacggcggcaccttcaatgctcgaggccag
tcgctctgggcctgtaaggctgcgggccgcaattgccccaatggatccacggcattgacg
atcagccaagcaaagaacgtgttgttgagcaaagtaaaggtccaaaatagccagaatttc
caaatcgcaatcatattcagccaagaaataaaagtggaaggggcgacgatcaccgcacca
ggcaatagccctaacacagacggaattcacatccatatgtcgagcttcatcaccatcacc
ggctccacaatggccaccggcgatgattgcgtctctctcggtgaaggtgtttccaatgct
tggattgagaacatcaaatgcggcccaggccatggaatctcgatcggaagtttaggtgat
ggcacagaaacgacgatggtacagaatgtgacagtgagctcggtggttttcacaggaaca
cagaatggatttagggttaagacatgggcgactccttcatctaaggggtttgtgagaggc
gttacttttgagcatggcactatgaagaatgtagggaatcccattatgatcgatcaaaac
tattgtccggttcctggcaattgccctaatgaaagctctggaataaagataagtaaggtg
acatttagtgatgtgcatgggacttcttcaacacaagtggcagtgaatctggactgtagc
aagagcaacccttgccaagggattcaacttaccaatataaaactgagttataagaggaaa
aatcatgaattggctaagtcattttgtaggaatgtgaagggaaagaattccggctttgtt
gtccctcctagttgcctttga
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