KEGG   Dendrobium catenatum: 110095659
Entry
110095659         CDS       T05027                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
dct  Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:dct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dct03036]
    110095659
   03400 DNA repair and recombination proteins [BR:dct03400]
    110095659
Chromosome and associated proteins [BR:dct03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110095659
DNA repair and recombination proteins [BR:dct03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110095659
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT VMP1_C XMAP215_CLASP_TOG
Other DBs
NCBI-GeneID: 110095659
NCBI-ProteinID: XP_020676941
LinkDB
Position
Unknown
AA seq 1150 aa
MVNAASWVSHIETFVDISRPAEQQKAGVNTVAGLVKNDFLTVEALVKEMELYLTTTDDTI
RARGILFLAEVLICLLSKALDSFTISSLAGFFSSRLADWRSLRGALIGCLALLKRKSNVG
MLADNDARTLAQSMLDNVQVQLLAMHDRKLCFEVFQCLLDAHSDSIASLGDDFVYGLIQA
VDQEKDPRCLVLTFHLVQSLVKLFLSQLGSEHVAQDLFEVLSCYFPVYFTHKIADDFEVK
REDLSDALMDAFCSTPYFEPFAIPLLLDKLSSSLPLAKIDSLKYLNKCLLNFGTERMLQH
AQNIWFALKDVILNHLPQAEILSSSVSVLGGDIKYHEHKIATEALICLKTTILQFTCPNN
VDFLTLIIDDNVVERSFCSVTMEGSYSDNDDKNDLKLSALGSILSVVANSSIFGCNRVFQ
DFFPRLMVALGIDLRTSKHSADAYVEIVSQKFNYGALYLSVELLASSRDLIATVLESSNS
KDSLRGIWWHLIQEFSGPLTSAFKSALMIPNKITAEGGNSNYMQEIIICSVKGLEVLATY
AGEHTPVPRKSFEDILEVFILIIISRYEDPFLWKLSLKSLVLIGSCIARFKDSNMQMIYN
EIVVRRLVRLLHKDSILPLDLILEAISEIGTCTLDLISPVIQGLEEAMLSSFLQACVDES
FKSSQDLVLFLDCYCTKILPWCHTSGSIEQPGMHFVINILEQMEDNIAFKMKPEMQDLLD
KMMMTMKLVVRGCAENNQYIILEKAYNIMLASANLPSNALLVSSSILEGFQLIPDFCELS
CKNKMLLYFLASIVTALHQQTPLTNVARLLNLLLVFTLKGHLPAAQALASVANKLPNAVI
LEETIEMILDSFSSVLSNNHQNEPHMLNSNDGASMHFCSNLQINAVIGIAWFGKALLMRG
HGRVKDISMVILKCLLSNKNIVPSSSHHQSGNFIGEDMHYLVARSAADAFHLLLSDSDVC
LNKNFHAIIRPLYKQRFFSSMLPVLHSAIKECNSPRTKALLYRAFGHTISGMPLTVLVAD
AKKVLPLLLDSLSVLDSDILNKDLIYSLLLVLSGFLIDEKGKEDIIGYVHIVIDHLIKLL
SYPHMMLVRETAIQCLTAITAFPYTRIYPLRTQVLGALAGAFDDKKRNVRQEAVKCCHAW
ASMASRSIRF
NT seq 3453 nt   +upstreamnt  +downstreamnt
atggtgaacgcagcttcttgggtctcgcacatcgagaccttcgtcgacatatctcgcccc
gcagagcagcagaaagctggcgttaatacagtggctggtttagtcaagaatgatttttta
actgtcgaggcattggtaaaagaaatggaattatacctgacaaccacggatgataccatc
cgcgcaagaggtattctttttcttgctgaagttcttatctgtcttttaagcaaagcctta
gacagttttacaataagtagtctggctggattcttctcatcaaggctggcagattggaga
tctttgcgtggggcactcattggttgcctggcacttctaaagaggaagagtaatgttggc
atgcttgctgataatgatgccaggacactagctcaatcaatgttggataatgtacaagtg
cagttgctagcaatgcatgatcgtaagttgtgctttgaagtttttcaatgcttgctggat
gcccactccgactcgatagcatctctgggtgatgattttgtttatggattaattcaagcg
gttgatcaagagaaggatccacggtgcttggtccttacgtttcatctagtccagagtctt
gtcaaattatttctgtcacaactgggttcagaacatgttgctcaggatctttttgaggtt
ttaagctgctattttcccgtatatttcacacataaaatagcagatgattttgaagtcaaa
agggaagatctatctgatgcactaatggatgccttctgttcaactccatattttgagcca
tttgctattccattgcttcttgataaactttcatcttctcttccattagcaaagattgat
tctttgaagtatctgaacaaatgtttgttgaattttggaactgaaaggatgttgcagcat
gcccaaaacatttggtttgctctaaaagatgttatcctcaatcatttgccacaagccgaa
atattatcatcatcggtttctgttttaggcggagatatcaaatatcatgagcacaagatt
gctacggaagctttaatttgtttgaaaacaaccattttgcagtttacttgccctaataat
gttgattttttgactttgattattgatgataatgttgttgaaagaagtttttgttcggtc
accatggagggaagctattctgataatgatgataaaaatgaccttaagcttagtgctctt
ggtagtatcttatctgttgtggcaaattcctccatttttggctgcaatagagtgtttcaa
gatttttttccacgtttaatggttgcccttggaattgatttaagaacgtcaaaacattct
gcagatgcttatgttgaaattgtttcccagaagtttaactatggggcactttatttgtct
gttgaactgcttgcttcgagcagagatttgatagcaacagtattggagtcgtccaattca
aaagattcattgcgaggtatctggtggcacttgattcaagagttctctggcccattaact
tctgcttttaaatcagccttgatgattcccaataaaatcactgctgaaggtggaaactct
aactacatgcaagaaataatcatatgcagcgtgaaggggttggaagtgcttgcaacatat
gcaggggagcatacacctgtgccaaggaaatcatttgaagacattttagaggtttttata
ttaattatcattagcagatatgaagatccattcttgtggaaattgtcattgaagtcatta
gtccttattggatcgtgcatagcaagatttaaagattcgaatatgcaaatgatttataat
gaaattgttgttagaaggcttgtcaggcttcttcataaagattctatattaccgcttgat
ttaatactggaggcaatctcagaaatcggtacttgtacattggatttaatttcaccagta
attcaggggcttgaagaagcaatgctttcaagctttttgcaggcttgtgttgatgaaagt
tttaaatcttcccaggatttggtcctttttcttgattgctactgcactaaaattcttcca
tggtgccatacctctggaagcattgagcaacctgggatgcattttgttatcaatatatta
gagcagatggaagataatattgcttttaagatgaagcctgaaatgcaggatctactggat
aaaatgatgatgacaatgaagcttgttgtcaggggctgtgcggagaacaaccagtatata
atcctagaaaaggcatataatattatgctagcatcagcgaatcttccatcaaatgctctc
cttgtttcttccagtatactggaagggtttcaacttattccagatttctgtgaattatca
tgtaaaaataaaatgcttctatactttcttgcatcgattgtgacggcccttcatcagcaa
acaccactaactaatgtggcaagattgctgaaccttctcttggtttttacacttaaaggg
catcttcctgcagctcaagccttggcttcggttgctaacaagttacctaatgctgtcatc
cttgaagaaactattgagatgattcttgactctttttccagtgtactcagtaataaccat
caaaatgaacctcatatgcttaacagcaatgatggtgcttccatgcatttttgttcaaac
ttacaaatcaatgctgtcattgggattgcatggtttgggaaagccttactaatgcgggga
catggtcgagttaaagacatatcaatggttattttgaagtgtttgctatcaaataagaat
attgttccatcatcttcccatcatcaatccggcaatttcattggagaggatatgcactat
cttgttgcgagatcagcagctgatgcattccatttgcttttgagtgactctgatgtttgc
ctgaataaaaatttccatgcaattataaggcctctctataagcaaaggttcttctcgagt
atgctgccagttttgcactcagccattaaggaatgtaattcaccaagaacaaaagcttta
ctttatcgagcttttggccacactatttctgggatgccattgaccgttcttgttgcagat
gcaaagaaggtcttgccattattgttggatagtttatctgttttagattctgatattctc
aacaaagatctgatatatagcttgcttttagtgctatctgggtttcttattgacgagaaa
ggaaaagaggatatcataggctacgttcatatagttatagatcacctgattaagttgctt
tcttaccctcacatgatgcttgttcgagaaacagcaattcaatgtcttacggctataacg
gcttttccttatacacggatctacccattaagaactcaggttctgggagctttagcagga
gcttttgatgataagaagagaaacgttcgtcaggaggctgttaaatgctgtcacgcttgg
gcctcaatggcttcacgatctattcgtttctga

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