Dendrobium catenatum: 110096389
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Entry
110096389 CDS
T05027
Name
(RefSeq) retinoblastoma-related protein isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dct03000
]
110096389
Transcription factors [BR:
dct03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
110096389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
TFCD_C
COP9_hel_rpt
Motif
Other DBs
NCBI-GeneID:
110096389
NCBI-ProteinID:
XP_028551136
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MVLRRESFGAMSPGIAGMDMEEAKRPSALQLADGAMEARFANLCKSGVGIDEGTAEEALA
LFGESKQILSGIILSVGSGSPEVVERLWSAFLLYCVIRLCSGKEKQESEDGRVKLSQILE
VAKLNALNFFKEVSHFSVKADNVLSNHYGPDWEKRIELKELHANVDQLCCLSRFYKKAYH
QLFKVSDTCNGRKLLLSNCEDYVSDYHYFGWLLFLALRTNVFSRFKDLVTYTNALVSILA
ILILHVPISLRNFPISNSPFFTKKSDKGVDLLASLSQSYDASEVELRRMMETANKLIADV
LKKKPCHASECKTENLYDINTDELTYFEDLLDEKSLQSNLLILNSDYDEIIKSKCELDER
IFLNVEDSLDANGGLNFSGDAISLSRERDNNAAVTTPTKSIITCAASHPAASPANGNFVG
NSRMVQWTPVSSTMTTAKWLREVVSPFPSRPSTGLQHFLESCDTDLTSTVIHRANIILEA
IFPSHYGERCISGSLQGANLMDSVWSEQRKLESLKLYYRVLESICKAESQRLNDNNLTSL
LSGERFHRCMLACASELVLATHKTVTMMFPAVLERTGITAFDLSKIIESFVRHEETLPRE
LKRHLNSLEERLLESMSWEKGSSLYNSLIVAKPALAAEINRLGLLAEPMPSLDSITLHKN
IATIGTQSSTSQKHGGSSGPDGDSRSPKRLCGENRRVVTDHNILKSPVRENLTSFNSPKL
KLPSLQSAFASPACPNPSTGGEPCAEAGISCFFSKISKLAAIRIRSLCERLGVPQQFVEH
VYFLIQQILNQKTALFFNRHIDQLILCSIYGVNKILNLDLTFKAIIYNYRKQPQCRTQVF
RNVYVNGSSIHNTKKGHEHIDIITFYNAVFIPSVKPLLVELGSSKVENSNGLAQDKCNNS
IGHIPSSPRLSTFPNLPDMSPKKVSASHNVYVSPLRQSKMDALLAPSSKSYYACVGESTH
AFQSPSKDLMVINSRLNCGRRVGGRLNFDLVSDSIVAGSLGPQNGSSGSSAAGTATDVTV
KSEPPDL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcggcgagaaagcttcggtgcaatgagtcctggtatagcgggtatggatatg
gaggaggccaagcgtcccagtgctctgcaattggctgatggcgcaatggaagctcgattc
gctaatctttgcaagagcggagtggggattgatgagggcacagcagaggaggcacttgca
ctttttggagaaagcaagcaaattctgtcggggatcattttgtcagttggaagcggatcg
ccggaggtagtcgagaggctttggtccgcttttcttctctattgcgtcattagactctgc
agtgggaaggagaaacaggagagcgaggatggaagagtgaagctatcccagattctggag
gtggctaagctgaatgctttgaactttttcaaagaagtttcccacttttctgttaaggct
gataatgttttatccaatcattatgggcctgattgggagaaaaggattgagttgaaggag
ttgcatgcaaatgttgatcaactctgttgtcttagcaggttctacaagaaagcatatcac
cagcttttcaaggtgagtgacacgtgtaatgggcgaaaacttctactttccaattgtgaa
gactatgtctcagattaccattattttgggtggctgctattcttggcgttgcgtaccaat
gtatttagccgctttaaagatctggttacctatactaatgcattggtgtcaatattggcc
attcttattctgcatgttccaataagcttgaggaactttcctatttcaaattcacctttc
tttaccaagaagtctgacaagggtgtggatcttcttgcttctttaagccagagctatgat
gcttctgaagtggagttgaggagaatgatggaaacagctaataaattaatcgcagatgtc
ctgaagaagaaaccatgccatgcttcagaatgcaaaacagaaaatttatatgacataaac
acagatgagctgacatacttcgaggatctgttagatgagaagtcacttcagagtaattta
cttattctgaatagtgattatgatgaaatcatcaaaagcaagtgtgaactcgatgagcgc
atatttctcaatgttgaggatagcttagatgctaatggaggcttaaacttttctggggat
gctatcagtttgtctcgtgaaagggataataatgctgcggttaccactccaacaaagtca
ataataacctgtgctgcctctcatccggctgcatcacctgccaatggaaattttgtgggc
aattctaggatggttcagtggacaccagtgagctccaccatgactactgcaaagtggctt
cgtgaagttgtttctccatttccttcaagaccttcaacagggcttcagcatttcctcgaa
tcctgtgacactgatttaactagcactgttatccacagggccaacatcatattggaggcc
attttccctagtcattatggagaacggtgcatttctggaagtcttcaaggcgcgaatctt
atggatagtgtatggtcagaacagcggaagttagaatctctgaagttatattatagggta
ttggaatcaatatgtaaagcagaatcacagagactaaatgacaataatcttacttcgtta
ttatccggtgagcggtttcatcgatgcatgcttgcttgtgcttctgagcttgttttggcg
acgcataaaactgtcactatgatgtttcctgctgtgctggaaagaacaggaataactgct
tttgatttgagcaaaatcattgaaagttttgtgaggcatgaggaaactcttccaagagag
ctaaagaggcatttgaattcattggaagagcgacttttagagagcatgtcatgggaaaaa
ggttcctctctttataattccttgattgtagcaaagcctgcattggctgcagaaataaat
aggttgggactcttagcagagccaatgccatcacttgattcaattacattgcataaaaat
atcgctacaataggaacccaatcttctacatcacaaaagcatggaggatcatcaggtcca
gatggagattccagatctccaaagagattatgcggtgaaaacagacgtgtagttactgat
cataatatcttaaaatcacctgtgagagaaaacctgactagcttcaacagtcccaaattg
aagttaccatctcttcagtctgcatttgcaagccctgcatgtccaaacccttcaactggt
ggggaaccttgtgctgaggcagggatcagttgtttctttagcaagatttcaaaattggct
gctatcagaatcagaagcctgtgtgaaaggctcggagtgcctcagcaatttgtagagcat
gtctactttctcatccaacaaattcttaatcagaagacagctctctttttcaacagacat
atcgaccaacttattttatgtagtatatatggagttaataagatcttgaatttagatttg
acatttaaggcaatcatttacaactacagaaagcagccacagtgtagaactcaagttttt
aggaatgtttatgttaatgggtcatcaatccacaatacgaagaaggggcatgaacatatt
gatatcattaccttctacaatgcggtatttattccatctgttaagcccttgttggtggag
ttgggttcttctaaagttgaaaacagtaatggcttggctcaagataagtgtaacaattcc
attggccatattccctcgtcgccccggttgtccactttccctaatcttccagacatgtca
ccaaagaaagtatctgcttctcataatgtttacgtttcacctttgcggcagtccaagatg
gatgctttactggccccaagttccaagagttactacgcctgtgttggtgagagcacgcat
gccttccagagcccatctaaagaccttatggtcatcaatagtcgtctaaattgtggcagg
agagttggaggccggctcaactttgatttggtgagcgattcaattgtagctggtagcctt
ggacctcaaaatggaagctcaggctcctcggctgctggcactgctacagacgtcactgtg
aaaagtgaaccacctgacctttga
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