KEGG   Dendrobium catenatum: 110096406
Entry
110096406         CDS       T05027                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
dct  Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:dct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dct03400]
    110096406
DNA repair and recombination proteins [BR:dct03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    110096406
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 ResIII zf-RING_5 RING_XB3-XBAT31 zf-RING_4 Baculo_IE-1 MEIOC zf-ANAPC11
Other DBs
NCBI-GeneID: 110096406
NCBI-ProteinID: XP_020678011
LinkDB
Position
Unknown
AA seq 1031 aa
MGSKASYEQVILVQSVLGENFTEMDIIRALHMANNDPSAAINIILDTPHLRLVEEKGSSV
KKSPAVASREAVSPSEESAEKQNLCSNFPVELDPPINRSIAQYEAPSSTYAPGNDEWWLL
GSSELAGLSTSKGRRLRAGDPVTFSFPSTISSKMCTKFSGRGRAVASCSEIVRFSSEEHG
EIGRIPNEWARCLSPLIKEKKIKVVGFCKFAPDVLGIMDTILLSVSVYLKSSMFRKSHQT
SLKVTNCSTDESTIHPLPTLFKLLGITPFKKAELSPDDLYGKKRPIESKDDLIEPSSTAP
AKKFRKLLSHGSRTENNQASISDSDVNNIVGIGDSSELEEMDPPETLLCELRSYQKQALH
WMLQLEKGRCLEKGSRTLHPCWDAYRLADERDLVIYLNAFSGNATIEFPSTQQIARGGIL
ADAMGLGKTIMTLALLLAHSDKGGSPTCSSIQDSNDDNNIGSSIDKFSSGSKKPASISGF
NKLKSKSILIRGGNLIVCPMTLLGQWKAEIETHAHQGSLSLYVHYGPSRPKDAKFLAQSD
VVLTTYGVLAAEFSAENAEDNGGLYSVQWFRIVLDEAHTIKSSKSQVSIAATALSADRRW
CLTGTPIQNNLEDLYSLLRFLRVEPWGNWALWNKLIQKPYEMGDECGLKLLQTLLRPIML
RRTKLSTDRDGRPIIVLPPADVGVIYCELTAAEKDFYEALFKRSKVKFDQFVEQGRVLHN
YASILELLLRLRQCCDHPFLVMSRGDTKDFADLNKLAKRFLKGSKGAAGGDSKAALSKAY
IMEVVEELRKGEEGECPICLEAFEDAVLTPCAHRLCRECLLASWRSTTSGLCPVCRTTVN
KQDLITAPTDCRFQVDVEKNWVESSKVSALLHELEKLRGSGSKSIVFSQWTAFLDLLQIP
LSRNKIVFARLDGTLNQQQREKVISQFTEEKDIMVLLMSLKAGGVGINLTAACNAFLLDP
WWNPAVEEQAVMRIHRIGQTKPVTIKRFIVKGTVEERMESVQARKQRMISGALTDQEVRT
ARIEELKMLFT
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgggaagtaaggcatcgtacgagcaagtaatcctcgttcaatccgtgttgggcgagaat
tttaccgaaatggacataatccgtgctcttcatatggctaacaacgatccctcggccgca
atcaacatcatattggataccccacatcttcggcttgtcgaggagaaggggagttccgtc
aagaaatctccagcagttgccagtcgtgaagctgtctctcccagcgaagagtctgcagag
aagcaaaacttatgttctaattttcctgtagagctagatcctcctataaatagatccatt
gcacagtatgaagctccttcaagtacatatgctccaggcaacgatgaatggtggcttctg
ggaagttcggagcttgctggcctctctactagcaaggggagaaggcttagggcgggtgat
ccagtgacattctctttcccatcgactataagttcaaaaatgtgcacaaaattttctggc
cgaggacgtgcagtggcatcttgttcggagattgtacgattttcgtccgaagaacatggt
gagattggtcgaataccaaacgagtgggcacgttgcctttcacctctcataaaagaaaag
aagattaaggtggtggggttctgtaaatttgctcccgatgttcttggcatcatggacaca
attctcttgtcagtcagtgtgtatttgaagagttcaatgttccgcaagagtcatcaaaca
tcacttaaggtcaccaattgttctactgatgaatctacaattcatccactccccaccttg
ttcaaattgctggggataactccatttaagaaggctgagttaagccctgatgatttatat
ggtaaaaaacgacccatagaatccaaggacgacctaatagagccttcatcaactgcacct
gctaaaaaatttaggaagttactttcacatggaagtagaactgaaaataatcaagcgagc
atatcagattctgatgtaaataatattgtgggaattggggatagctcagaattagaggaa
atggatccacctgaaacattgttgtgtgaattgcgttcttatcaaaagcaggctctacat
tggatgctgcagcttgagaaaggaagatgcttagaaaaggggtcgagaaccctacatcca
tgttgggatgcatatcgccttgctgatgagagggatcttgttatttacttgaatgctttt
tctggcaatgctactatagaatttcctagtactcagcaaattgcaagaggaggaattttg
gcagatgcgatgggattaggcaagaccataatgaccttagctcttttgcttgctcactct
gacaaagggggatcacctacttgttcttcaattcaggactctaatgatgataataacatc
ggtagcagtattgataagttttctagtggttcaaaaaaaccagcaagcatctctggcttt
aacaaattgaaatcaaaatccatactgattcgaggtggtaatctaattgtctgtcctatg
acactgttaggccagtggaaggctgagattgagacacacgcccatcaaggttccctttct
ctttatgttcattatggacctagcagaccaaaagatgcaaagtttcttgcacagagtgat
gttgttctgactacctatggcgttctggctgcagagttctcagctgagaatgctgaagac
aatggtggtctttactcagttcaatggttcagaattgtgctagatgaagcacacactata
aaatcatcaaagagccaagtttctatcgctgctacagctctaagtgctgacaggagatgg
tgtcttacagggacccccattcagaacaatcttgaagatctatacagcctacttcgattc
ttacgggtagagccttggggaaattgggctttgtggaataagctcattcaaaagccttat
gagatgggtgatgaatgtggcttaaagctgctacaaaccttgctaaggcctataatgtta
agaagaactaaactgagcacagatagagatggcaggccaatcattgttcttccaccggca
gatgttggagtaatttattgtgagttgacagcagcagaaaaggacttctatgaggctttg
ttcaaaagatccaaggtgaaatttgatcaatttgttgagcaaggacgagtccttcacaat
tatgcttcaattttagagttgctattacgtcttcgccagtgttgtgatcatccgttcctt
gtgatgagtcgtggtgatacgaaagattttgcggatctcaacaagcttgcaaagcgtttc
cttaaaggcagtaagggtgctgctggcggagattctaaagctgccctttcaaaggcatat
attatggaggttgtggaagagttgcggaagggcgaagaaggggagtgtccaatctgcctt
gaagcatttgaagatgctgtgttgactccatgtgctcatcgcttatgtcgggaatgtctc
cttgccagctggcggagtactacatctggcctttgtcctgtttgtcggactactgttaac
aaacaagaccttataactgctcctactgactgtcgttttcaagttgacgttgagaagaat
tgggttgaatcatcaaaagtttctgcacttcttcacgaactggaaaaacttcgaggttct
ggttctaaaagtattgtctttagccaatggacagcttttttggatctcctgcagatccca
ctatcaagaaacaaaatagtatttgctcgtttggatggaactttgaatcaacaacaaaga
gaaaaagtgatcagtcagtttacagaggagaaagacattatggtattattaatgtcattg
aaagctggcggtgttggaataaaccttactgctgcatgcaatgccttcctcttggatcct
tggtggaatccagcggttgaagagcaagctgtcatgcgtattcatcggattggtcaaact
aaacctgtaacaattaaaaggtttattgttaagggaactgtcgaggaaagaatggaatct
gtgcaggcacggaagcaaaggatgatatctggagcactaactgatcaggaagtacgaact
gcaagaatagaggaactaaagatgctgttcacgtga

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