KEGG   Dendrobium catenatum: 110096911
Entry
110096911         CDS       T05027                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
dct  Dendrobium catenatum
Pathway
dct03020  RNA polymerase
dct03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110096911
  09124 Replication and repair
   03420 Nucleotide excision repair
    110096911
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dct03021]
    110096911
   03400 DNA repair and recombination proteins [BR:dct03400]
    110096911
Transcription machinery [BR:dct03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110096911
DNA repair and recombination proteins [BR:dct03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110096911
SSDB
Motif
Pfam: Zn_ribbon_RPB9 RUBY_RBDX
Other DBs
NCBI-GeneID: 110096911
NCBI-ProteinID: XP_020678721
LinkDB
Position
Unknown
AA seq 118 aa
MSTPIKICPECDNLLYPKEDKKRKILLSACRTCSYTEMAERNRVYRNEITHITERPQILR
DAYADPTLPRQKGLKCPVCNHPHVAFFLINPTINFARMYACCNPSCCHNWRADGQSIT
NT seq 357 nt   +upstreamnt  +downstreamnt
atgagtactcccataaaaatctgtcccgaatgcgacaatctactctacccaaaagaagat
aagaagcgcaagatcctactcagtgcctgtcgcacctgtagttacacggagatggcggaa
agaaaccgcgtgtacagaaatgagataacacatatcaccgagagacctcagatcttgcga
gatgcttatgcggatcccacacttcctcgtcaaaagggactcaaatgccctgtctgcaac
catccacatgttgcattcttcttgattaatccgacgataaacttcgctcgaatgtatgct
tgctgcaacccaagttgttgtcataactggagagcagatggtcaaagcattacttaa

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