Dendrobium catenatum: 110097156
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Entry
110097156 CDS
T05027
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dct
Dendrobium catenatum
Pathway
dct00040
Pentose and glucuronate interconversions
dct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110097156
Enzymes [BR:
dct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110097156
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110097156
NCBI-ProteinID:
XP_020679064
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MAKNLKFLPLCVMGFLVLLAGGLGWIGAGGKISAARTTGAARRSLIEKAESANFSTTARS
ELGPVIGAVDDPEKVASEVHMAINASTTRRNLAFLSCGTGNPIDDCWRCDPNWQTERKRL
ADCGIGFGRNAIGGRDGRYYVVSDPSDDDAVNPRPGTLRHAVIQDEPLWIVFKRDMVITL
KEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHY
GWRTMADGDGVSIFSSSHIWVDHCSLSNCADGLVDAIMGSTAITISNNYFTHHNEVMLLG
HSDSYDRDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTIN
SQGNRYLAPTNPFAKEVTKRVETNQNIWKGWNWRSEGDLLLNGAFFTPSGAGASASYSRA
SSLGAKSSSMVASITSGAGVLSCRAGSQC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaacttgaagtttctgcctctgtgtgttatgggctttcttgtgcttctcgca
ggtggcctggggtggattggtgccggaggaaagatctctgctgccaggactactggagca
gctaggcggagtttaatcgagaaggcagagagcgcaaatttttctaccacagcgaggtct
gaactggggccggtgatcggggctgtcgacgatccagagaaggttgcctctgaggttcac
atggcgatcaacgcaagcacgacgaggcgcaacctggctttcctgtcatgcggcaccgga
aaccccatcgatgactgttggcgctgcgatcctaactggcagacagagcgcaagcggctc
gccgattgtggcattggtttcggtcgcaacgccatcggaggccgcgacggacgctactac
gtcgtctccgacccaagcgacgatgatgcagtgaacccccggccagggactctccgtcat
gccgtgatccaggatgagccgctctggatcgtgttcaagcgcgacatggtgattactctg
aaggaggagctcatcatgaacagcttcaagaccatcgacggccgtggcgtcaatgtccac
atcgccaacggagcctgcataaccatacagtttgtgaccaatattatcatccacgggctt
catatccatgactgcaagcccaccggaaacgccatggtgcgaagctcaccttcgcattat
ggttggagaaccatggctgatggagatggggtttccatcttcagctcgagccatatttgg
gttgatcactgctcgctctccaactgcgccgacggactcgtggacgctatcatggggtcg
acggccattaccatctccaacaattacttcacacaccacaatgaggtgatgcttctgggc
cacagcgattcctacgacagagacaaggcgatgcaggttaccatagcttttaatcatttt
ggagagggtcttattcagcgaatgccaagatgcaggcatggctacttccatgtggtcaac
aatgattacactcactgggagatgtatgcaattggtggaagcgcagatcccaccatcaac
agccagggcaatcgatatctcgctccgactaacccatttgccaaagaggtgacgaagagg
gttgaaacaaatcaaaacatttggaaggggtggaattggaggtcagagggggatcttctt
ctcaacggagccttcttcactccctccggcgctggggcatctgcgagctattcaagagca
tcaagccttggcgccaagtcttcttccatggtggcatccatcacctccggcgccggagtt
ctttcctgtcgcgccggatctcaatgctag
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