Dendrobium catenatum: 110097169
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Entry
110097169 CDS
T05027
Name
(RefSeq) histone-binding protein MSI1 isoform X2
KO
K10752
histone-binding protein RBBP4
Organism
dct
Dendrobium catenatum
Pathway
dct03082
ATP-dependent chromatin remodeling
dct03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110097169
03083 Polycomb repressive complex
110097169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dct03036
]
110097169
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110097169
Histone modification proteins
HAT complexes
HATB complex
110097169
HDAC complexes
Sin3A-HDAC complex
110097169
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110097169
PRC2.2
110097169
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110097169
Heterochromatin formation proteins
Other heterochromatin formation proteins
110097169
Chromatin remodeling factors
NuRD complex
110097169
NuRF complex
110097169
NuRF complex (fruit fly)
110097169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
WD40_RFWD3
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_RIG_1st
Beta-prop_HPS5
MIOS_WD40
Beta-prop_TEP1_C
RMC1_N
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
110097169
NCBI-ProteinID:
XP_020679078
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MAKDEDDFRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDREEPPGKD
YSVQKMILGTHTSDNEPNYLMLAQVQLPLEDAENDARQYDEERGEIGGFGCASGKVQIIQ
QINHEGEVNRARYMPQNQFIIATKTVSADVYVFDYSKHPSKPPLDGACSPDLRLKGHTTE
GYGLSWSVFKQGHLLSGSDDAQICLWDINGSPKNKSLDALQIFKVHDGVVEDVAWHLRHE
YLFGSVGDDQHLLIWDLRSPTANKPTHSVIAHQGEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHTFDCHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDLPNDEP
SKAS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggatgaagatgacttccgaggggagatcgaggagcggctgataaacgaggag
tacaaaatctggaagaagaacacgccgttcctttacgatctggtgattactcatgcgctg
gagtggccgtcgctgacggtgcaatggctaccggaccgtgaggaaccgccggggaaggac
tactctgtccagaagatgatactcggcacccatacttccgacaatgagcctaactacctc
atgctcgctcaagtccagcttccgcttgaggatgctgagaatgatgcgcggcagtacgac
gaagagcgcggcgagataggagggtttggttgtgctagcggcaaggttcaaataattcag
caaataaatcatgaaggggaagtgaaccgagctcgatatatgcctcaaaatcaatttatt
attgctacaaaaactgtcagtgcggatgtttatgtatttgattacagcaaacatccttca
aaacctcctctagatggtgcatgtagtcctgatttgagattgaagggccatacaactgaa
ggttatggtttatcttggagcgtctttaaacaaggacacctattgagtggttctgacgat
gctcaaatatgcttgtgggatatcaatggatcccccaagaataagtcacttgatgctctt
cagatatttaaggtccatgatggcgttgttgaagatgttgcttggcatttgagacacgag
tacttgttcggctctgttggtgatgatcaacatttgcttatatgggatttgcgttcccca
actgctaataagccaactcattctgtgattgctcatcaaggagaggttaattgcctggca
ttcaatccattcaatgaatgggttgtagcgacaggttcaactgataaaactgttaagctt
tttgaccttcgcaaaattagcaccgccctacatacttttgactgtcacaaagaggaggtt
ttccaagttggctggagtcccaagaatgagacgatacttgcatcttgttgcctgggtagg
aggcttatggtgtgggatctaagcaggattgacgaagaacaaacacctgaggatgcagaa
gatggcccaccagagttgctttttatccatggcggacacactagcaagatctctgatttc
tcctggaacccttgtgaggattgggtcattgccagcgttgctgaagataacatccttcag
atatggcagatggcagagaatatctaccatgacgaagatgatttgcccaacgacgagcct
tcaaaagcctcttaa
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