Dendrobium catenatum: 110097170
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Entry
110097170 CDS
T05027
Name
(RefSeq) protein RST1 isoform X1
KO
K27498
focadhesin
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110097170
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110097170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3730
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
110097170
NCBI-ProteinID:
XP_028554713
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MDSTYAALLEKTRLPQPSFQRFAVVSLFRRLESSLGVLGPNSAVCHDAISQCLRSPFAAV
VDQAVHELCRLVAVGDRLSISVALIEMQSALEGCEKRFAPVFVKGIGFLCRFAFCIDSSW
GRRFELVDLHPFVKVLSCCKESHEELIEQVLLFIVRNKYLGINEVVRFLRPFIVFSMIWK
SSSACVYFFSRNLISAIASLSCSFPLEAISILKLLTDCLKYLPLTNQEEFLYIVTSAEQI
VDAFVVVLQQTVGIEKDVATDARKCSVEVLCMLLSICASFHRKALVQVEPVIEISRHLLV
AQKELGLCYAFEFVNVVVSASVILAQVEFEHDQLSVLKLLILLMEWKTEELSTKRASCSL
GEELLIVFPVINLLSSPSKPVRAAVTHLLSLAESFVLNFMSVLKKTEVSFTDCPILIEAE
TIPLRLLHHLFTQGQQLPYSSYFFLFTSDKITCDNEKYCGPLYWTSWLREHLLTIEREKT
TFPQSSESHYEGVNILLGSIAYSLVISPAFDTSAVDPLVALGVQNPKLGMTMFQAALFYI
NILLKFERNSSKILLNLLEVLPSLASNSAMVKIIVQTILPMLHKNAKLSLHAVAIRLLCK
TWVVSDRVFQHLQGVLSPKTLSNFESVREICVSVAASVRDVCKDNPDRGVDLILSVSSCI
ESDDSAVKALGLHSLSSLCEADVVDFYTAWEVVAKHVNTYTEEPVVAASLVTLLRWGALD
VETYPDIARIIMLILWEVGTLRSYSSGCLWVKARTIAFQSMMHYEIVKFQEIIPEFKEKI
LQCLLNECNAEVLEAMEEFEIKIINFEHTNRRRALKERRPLGYKVAKLLDVFPQALFSPG
NLNVNAIEFPGAALLSYVFTPKELQGSSNDVPRIHALFEKALIEIAESLPLSRNILIALL
TLESWKAFIQQWIKALVASSDVKSSSSELDNELQSAGDILKICRKVAEEAVPQVSINAAL
AIGALCLVVPSSSYAVICSASDFLLNWLVDSEHEHHQWSSSISLGLISNCFHATDRMLKM
NVVTVLIQEACNSKSRLVIGACGLGLGFACQGLLSNAEVDSNRFTEGNLLCDVIKTLSMV
LSKLCPLASDSLKNLIESFLLHGYDSAEASSVLPQCKLDSLEDEEPWGIAGLVLGLGNCV
FAMYRLGLNDAVLILKDILLSWVPSLEPSNKSSLFCNEMTEISLAVGACLAIPMVVAFCQ
NVELMIGDIDAILIRYVSLVSDLLNSSVSEIHYQNLVMASCIGAGSFISCILNDGVHSIR
YDDIKHLLEFLRNGYSNSHPPLVHLGAMIGVVNAFGAAAGDLTYKHIQASFLPISLDLMV
VG
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggacagtacgtacgccgctctcctcgagaaaactcgcttgccccagccttcctttcag
cgtttcgccgtcgtctccctcttccgccgcctcgagtcatccctcggagtccttggccca
aactccgctgtatgtcacgatgccatctctcagtgcctccgctccccttttgctgccgtc
gtcgatcaggccgttcacgagctctgtcgtcttgtcgccgtcggcgatcgcctttccatt
tctgtcgcgcttatcgagatgcagtctgccctagagggatgcgagaagcgtttcgccccc
gtctttgtgaaggggattggcttcctctgccgcttcgctttctgcattgattcttcctgg
ggccgtcgttttgagctcgtagacctacacccatttgtcaaggttctttcttgctgcaag
gaatcacatgaagagcttattgaacaagttttgttgttcattgttcgtaacaaatatctt
ggaattaatgaggttgtgaggttcttgaggccatttattgtgttttctatgatttggaag
tcttcttctgcttgtgtatatttcttttcgaggaacttgatatcagctattgcatcactg
tcatgttcatttccattggaagcaatcagcattttgaagctcctcacagattgcttgaag
tacttgcctttaacaaaccaagaggaatttctgtacattgtaacttctgctgaacaaatt
gtggatgcttttgttgtcgtcttgcaacaaacagttggcattgagaaggatgtggcaact
gatgctcgaaagtgtagtgtagaggttttgtgcatgcttctatcgatttgtgcttccttc
catagaaaagctctggtacaagttgagcctgttattgagatctcaaggcatttgctggtg
gcccaaaaggagcttggactgtgctatgcttttgaatttgtgaatgtagttgtctctgct
tctgtaatcctcgctcaggtggagtttgaacatgatcaactttctgttctaaagcttcta
atacttctaatggaatggaaaacagaagagttgagtaccaaaagagcttcatgctctctc
ggtgaagagcttctcatagttttccctgttatcaaccttttatcgtctccatctaagcct
gttagagcagcggtcactcatttgctttcactagctgaaagttttgttttaaatttcatg
agtgttttgaaaaaaacagaagtttctttcaccgactgccccattctgattgaagcggag
actattcctttgaggcttctccatcatcttttcactcagggccaacaattgccatatagt
tcctatttctttttgtttactagtgataagatcacttgtgacaatgaaaaatactgtgga
ccattatactggacgtcatggttaagggagcatctattaactattgagagggagaaaact
acatttcctcaatcatcagaaagccattatgaaggggtgaatatattgctaggctcaata
gcttacagtttagttatatctcctgcttttgacacatctgcagttgatcccctcgttgcc
cttggtgttcagaaccctaaactgggcatgacaatgtttcaagctgctctcttctatatt
aatattctattgaaatttgagagaaattcttcaaaaatacttctcaatcttctggaagtg
cttccatctctggcttctaactctgccatggtgaaaattattgtgcagacaattttacct
atgcttcataaaaatgcaaaactatcactgcatgctgtggccattcgtttgctttgtaag
acttgggtcgtttctgatagggtatttcagcacttgcaaggtgttctgagtccaaagaca
ttatcaaattttgagagtgtcagggagatttgtgttagtgtagctgcttcagttcgtgat
gtttgcaaggacaatccggacaggggtgttgacctcatactttctgtgtcgtcatgcatt
gagagtgatgattccgctgtgaaagctcttggcctgcacagtctttcttcgctctgtgaa
gctgatgttgttgatttctatacagcatgggaagttgttgcaaaacatgtcaacacttac
actgaagaacctgttgttgcagctagcttggtcactctattgcgatggggtgcattggat
gtggaaacttatcctgatattgctaggattattatgctaatattatgggaagttggaacg
ttgaggagttattcttctgggtgcttgtgggtgaaagcaagaacaattgcattccagtcc
atgatgcattatgagattgttaagtttcaggaaattattcctgaatttaaggaaaagatt
ttgcaatgccttcttaatgagtgtaatgctgaagttcttgaggcaatggaggaatttgaa
atcaagataatcaattttgagcacacaaaccggcgcagagcactcaaagagagaagacct
ttggggtacaaagttgcaaaattgctggatgtttttcctcaggctttgttctcaccagga
aatcttaatgtaaatgcaatagagtttcctggtgctgctctgttatcttatgttttcacc
cccaaagaactgcagggctcatcaaatgacgtcccaagaattcatgcattatttgagaag
gcactaatagaaatagctgaatcacttccgctatcaagaaatatattaattgcacttctt
acactagagtcatggaaagcatttattcaacaatggatcaaggctttggtggcatcttct
gatgtaaaaagttcatcaagtgagttggataacgaattgcagagtgctggtgacatactg
aagatatgtcgtaaagttgctgaggaggcagtccctcaagtttctataaacgcagctttg
gcaattggtgcactctgtttggtggttccttcatcatcttatgctgttatatgctctgcg
tcagacttccttctcaattggttagttgattccgagcatgaacaccaccagtggtcctct
tcaatttctttgggattgatatcgaactgctttcatgcaactgatagaatgctaaagatg
aacgttgtaacagttcttattcaggaagcttgtaatagtaaaagccgtcttgttatagga
gcttgtggattgggacttggttttgcatgtcaaggccttctttcaaacgccgaagttgat
tccaatagatttacagagggaaatttactttgtgatgtgattaagacgcttagtatggta
ctaagtaagctctgtcctcttgcttcagattcccttaaaaacctgattgaatcttttctt
ctgcatggctatgatagtgcagaggcttcttcagtgttgcctcaatgtaaacttgatagc
ttggaagatgaagagccttggggtatcgcaggacttgtgttgggattgggaaattgtgtt
tttgcaatgtacaggcttgggttaaatgatgctgtgctgattctgaaagacattctcctt
tcatgggttccttctcttgaaccatccaacaagagttcgttattttgtaatgaaatgact
gagatatcattggctgtaggcgcatgccttgcaattccaatggttgttgcattttgccaa
aatgttgagctaatgattggtgacattgatgcaattttgattcgttatgtttcccttgtt
tctgatcttctgaattcaagtgtgtctgaaattcattatcagaatctggttatggcatct
tgtattggagctggatcatttatctcatgcatattgaatgatggggtacactctataaga
tatgatgatataaaacatctgctggaattcttaagaaatggatactcaaattctcatcca
cctcttgttcatttgggtgcgatgattggagttgttaatgcattcggtgcagctgcgggg
gatctcacttacaagcatattcaggcttcatttttgccgatcagtcttgacctaatggtt
gttggctaa
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